Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0944 ATGGAACAAGGGTTTAGCCAAAACTCAGTTCCTCCTCCAGGTTCCATTGACAAGTCCAGGATTTTGGACATTAAACCTATGCGGTGTTTGATACCTGTTTTCCCAATGTCGTCACAAGCTGCACCCTCTGGGGAGTACCCTTCTGGGTTTTCTCCATTTTTCCCATTTGGTGCACCTCATCAAACTCCCACTGGGGTGGCAGCAGGGGGTGGTGCCATACCTGCTCCCATAAGGGCATTTAGGAGCCCACTAGGGGCAGGAGACACTAGTGCAACAGTGGAGGGTGATACTTCTGGGAAGAAAAAACGAGGACGCCCTCGCCTCAACAAATCACCTGAAAAGAATGATAAGATAAGTCAAGAGTCACATGTTGATGTAAGTGCTTTAGTTGGTATTAGTCCAGCTCAGAGAGACGATGGTAGCCGTGAAGTGGTTAATCTTGTGCTCATGACGTTTGATGCGCTTCGAAGAAGGCTCTGTCAACTGGAAGAAGCCAAGGAATTGAGCTCAGGTTCAATCAAGCGTGCGGATTTGAAAGTTTCAAATACTTTGATGAGCAAAGGAATTCGAACAAACATGAGGAAGAGAATAGGACCAGTTCCTGGGGTTGAGATTGGGGACATTTTCTTTTTCCGAATTGAATTATGTCTTGCAGGTTTGCATGCTCCCTCCATGGGTGGAATTGATGCATTGCATATCAGGGGTGAGTTTGAGGAGGAAACTCTTGCTGTAAGCATTGTTTCATCAGGAGAATATGACGATGATGCTGAGGATAGTGATGTTATAATTTATACCGGTCAGGGTGGGAACTTCTTCAAGAAAGGTAAGCATGCAATCGATCAAAAGCTTCACAGGGGTAATCTTGCTTTGGATAGGAGTTCGCGGCAACACAATGAAGTAAGAGTCATCCGGGGCATGAAAGACGGTGTGAATCAAAATGCAAAGATCTATGTCTATGATGGCCTGTATAAAATCCAAGATTCATGGATAGAAAAAGCAAAAAGTGGCGGCGGCATATTTAAGTATAAGTTAGTAAGAATGGCTGGACAGCCTAGTGCCTTTGCTGTTTTGAAATCGGTTCAGAAGTGGAAATCTGGCTCCCCAAGGACTGGACTTACTCTTGCAGACCTTTCTTCGGGAGCTGAGAGTATTCCTGTACCACTTGTCAACGAGGTTGATAATGTGAAGGCACCTGCTTATTTCACCTATTTCCATTCTATTAAACATCCAAAATCATTCAGTTTAATGCAGCCTTCGCATGGATGCTGCTGTACTAAAGCATGTATCCCTGGTGATTTGAACTGCTCTTGCATTAGGAGAAATGAAGGTGACTTTCCATATACTGGCAGTAACATTCTGGTTAGTCGGAAGCCATTGGTTCATGAATGTGGCCCCACATGCCAGTGTTTTCCTAACTGCAAAAATCGAGTATCCCAAACTGGTTTAAAGCACCACATGGAAGTGTTTAAAACAAAGGATAGAGGGTGGGGTCTTAGATCCCTGGATCCTATTCGTGCTGGTACTTTTATCTGTGAATATGCTGGAGAAGTTATTGACAGGGCCAAGGTAAGTCAGCTTGTGAGGGAAGGAGATGAGTATGTTTTTGATACAACTCGTATTTATGATAAATTCAAGTGGAATTATGAGCCTAGGTTATTGGAAGAAGTGGGTACCAATGACTCAAGTGAGGATTATGCTATACCATATCCTTTAATTATAAGTGCCAAGAATGTTGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCTGTCATATATGAAGAAAACAACCAATCTTACCTGCATGTTGCATTTTTTGCCCTCAGACACATTCCACCAATGAAAGAGTTAACATATGATTATGGATTTGCTGGATCTGATCGCGCTGAGGGTAGCAGTGCATCCAAAGGGAGAAAGAAATGCTTATGTGGATCATCAAAATGCCGCGGCTCTTTTGGTTAA 1983 0.4342 MEQGFSQNSVPPPGSIDKSRILDIKPMRCLIPVFPMSSQAAPSGEYPSGFSPFFPFGAPHQTPTGVAAGGGAIPAPIRAFRSPLGAGDTSATVEGDTSGKKKRGRPRLNKSPEKNDKISQESHVDVSALVGISPAQRDDGSREVVNLVLMTFDALRRRLCQLEEAKELSSGSIKRADLKVSNTLMSKGIRTNMRKRIGPVPGVEIGDIFFFRIELCLAGLHAPSMGGIDALHIRGEFEEETLAVSIVSSGEYDDDAEDSDVIIYTGQGGNFFKKGKHAIDQKLHRGNLALDRSSRQHNEVRVIRGMKDGVNQNAKIYVYDGLYKIQDSWIEKAKSGGGIFKYKLVRMAGQPSAFAVLKSVQKWKSGSPRTGLTLADLSSGAESIPVPLVNEVDNVKAPAYFTYFHSIKHPKSFSLMQPSHGCCCTKACIPGDLNCSCIRRNEGDFPYTGSNILVSRKPLVHECGPTCQCFPNCKNRVSQTGLKHHMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVIDRAKVSQLVREGDEYVFDTTRIYDKFKWNYEPRLLEEVGTNDSSEDYAIPYPLIISAKNVGNVARFMNHSCSPNVFWQPVIYEENNQSYLHVAFFALRHIPPMKELTYDYGFAGSDRAEGSSASKGRKKCLCGSSKCRGSFG* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0944 660 Pfam SAD/SRA domain 197 350 IPR003105 -
Apr2g0944 660 Gene3D - 180 363 IPR036987 -
Apr2g0944 660 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 660 IPR025794 GO:0016571
Apr2g0944 660 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 14 658 - -
Apr2g0944 660 Gene3D SET domain 367 659 IPR046341 -
Apr2g0944 660 ProSiteProfiles YDG domain profile. 198 346 IPR003105 -
Apr2g0944 660 SUPERFAMILY PUA domain-like 180 366 IPR015947 -
Apr2g0944 660 SMART preset_2 374 468 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr2g0944 660 MobiDBLite consensus disorder prediction 80 121 - -
Apr2g0944 660 ProSiteProfiles SET domain profile. 484 629 IPR001214 GO:0005515
Apr2g0944 660 SMART set_7 484 635 IPR001214 GO:0005515
Apr2g0944 660 SMART G9a_1 193 350 IPR003105 -
Apr2g0944 660 ProSiteProfiles Post-SET domain profile. 644 660 IPR003616 -
Apr2g0944 660 ProSiteProfiles Pre-SET domain profile. 420 481 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr2g0944 660 SUPERFAMILY SET domain 383 657 IPR046341 -
Apr2g0944 660 Pfam SET domain 495 629 IPR001214 GO:0005515
Apr2g0944 660 Pfam Pre-SET motif 378 476 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr2g0944 660 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 14 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0944 Apr-Chr2 15428589 15432239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0944 8 660 Su(var)3-9 homologs AT1G73100 53.254 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr2g0944 SAD_SRA 1.2e-46 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0944 2 15428589 15432239 Apr5g0878 5 12872291 12875164 PCT