Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0938 ATGATGGCTACAGAACCTCAGAGGGTAGTGGTGATCCAAGATGCATCAAGAGATGTTAGTTTAAAGGCAATTCTTAGGGCCCTGAGAAAGTTATCAGTTAAGGCTGGAGATCAGCTTATAATTGTTGCTGTTCTTGATTGGATTAGCAGTCCTAGTACGTTTTCTTTTTTCAGAAGAAAGAGTTTGGGTTACATGGTGAAAGTTGATTCCAGTTCAATTATTTCAACAAACCAGAAAGTTATTGAGAAACATACCAGAAGAAAAGAAGACTATCTTTTGAACCGGAAAATTAAGGAGCTCATCCAGTATTGTAAAATGAATGAGATTGGACTCCAAATAGAAGTTCCTCTGGGCCTTCCTGTAGAAGTTGCTTCCAATGCTGCCCAGGATTTTCAGGCAACAAGTTTGATACTTGTTAGACAAATGCACAAAGATATGAAGGAGCTCATGGACATGCTCCCTTGTGGCATGTATAGGATAACAAGTGACAATTCAATCGAGAAGTTGAAAGATCCAAAATCAACAGCCATCAGCAAATCACTTGCAGATAGGCAAGAAAATGTAAGCTATAAAGAAATGTTTCCAGGAAGTGAAGAGGAAGCACGTTCTCTTCAGATGTCTAGGTCTTCATCAAGTGATCTGTTGGCATCAGCTGTTTCAAGTCAATGGAGTACTGAAGCCTCAACTTCCAGTCTCGGAAGCTTGCGGTATGGTCGCCAAAAACACCAAGACGGGAAGTTTTATTCAAATATAGAACAAGTAACATTAGGGAACCAATCACTATTTCACATTTCGGAGAATCAAGAAACACACCAAATAGAAGTAAACCAAAAGGAACAGAACAATGAAACATCGCATATGGAGGAAGAATTTACAAATTCAATTTGTTCTGTGTGCAATAATAGACGACTGAAAATTGGATGGAAGAGAGATTTCAGTTATGTAGAGCTCTACAATGCTACACAGGGATTTTCTCCTAAGAATTTTCTATCGGAAGGTGGATTTGGATCTGTCTTCAAGGGACAGCTTAATGGAATCAAGATTGCTGTCAAGCAGCATAAAAATGCAAGCTTCCAAGGAGAGAAAGAATTTAAGTCTGAAGTAAATGTTCTTAGCAAAGCAATACATGATAATGTGGTCATGTTGCTTGGTTCATGCTCAGAAGGATATAATAGGCTTCTTGTTTATGAATATGTCTGCAATGGCTCACTTGACCAACATCTGTCAGAACACTCTCGCTCCCCTCTTAATTGGAAGGATAGGATCAACGTAGCTATTGGAGCTGCCAAAGGCTTACTCTACTTACACACGAACAACATAATACATAGAGATGTGAGGCCAAACAATATCCTTATAACACATGATCATCAACCATTGCTGGGAGACTTTGGGTTGGCAAGAAATCAAAATCAAGACTCAATACACTCGACAGAAGTTGTTGGAACTTTCGGGTATTTGGCACCTGAATATGCAGAACACGGCAAAGTGTCAACCAAAACAGATGTATATTCTTTTGGGGTGGTTCTACTACAGCTAATAACTGGAATGAGAACTACAGATAAAAGACTTGGAGGAAGAAGTCTTGTGGGATGGGCAAGGCCACTTTTAAAAGATAGGAACTATCCAGATCTAATTGATGAAAGGATCCTTTATTCTCATGATGTCCATCAACTATTTTGGATGGTGAGAATAGCAGAGAAATGTCTAAGCAGGGACCCTCAGAAGAGACTAAATATGAATCAGGTTGTTGATGCTTTGACTGACATTGAGCAAGGCAGAACATGTGACACCATAATAAGGGATTACTCTCCTGCAAGGTCAGATTCATTCTATGGTGCATCAGACTGTGATGAATATGAAGATGAAATGCAAGGATCCTTCGAGATCGAAGGCGAGTTACAAACTCACAGTTCAGAATCCACAGCAAGTAATTGCTTAAGTCAAATGATGCAAATGATTGTAAGACAGCCACCATCTCCTCCAGTTAAGAGCATCTCTTCAAGTTGCTCAAGCTTATTTAAGTTTATTGAAGAATCAACCTGTCATGTAGAAGCACAGAATGAAGAGAATTCAGAAATAACAAAATCCAATGAGGTGTTACACAATTGTTAG 2112 0.3911 MMATEPQRVVVIQDASRDVSLKAILRALRKLSVKAGDQLIIVAVLDWISSPSTFSFFRRKSLGYMVKVDSSSIISTNQKVIEKHTRRKEDYLLNRKIKELIQYCKMNEIGLQIEVPLGLPVEVASNAAQDFQATSLILVRQMHKDMKELMDMLPCGMYRITSDNSIEKLKDPKSTAISKSLADRQENVSYKEMFPGSEEEARSLQMSRSSSSDLLASAVSSQWSTEASTSSLGSLRYGRQKHQDGKFYSNIEQVTLGNQSLFHISENQETHQIEVNQKEQNNETSHMEEEFTNSICSVCNNRRLKIGWKRDFSYVELYNATQGFSPKNFLSEGGFGSVFKGQLNGIKIAVKQHKNASFQGEKEFKSEVNVLSKAIHDNVVMLLGSCSEGYNRLLVYEYVCNGSLDQHLSEHSRSPLNWKDRINVAIGAAKGLLYLHTNNIIHRDVRPNNILITHDHQPLLGDFGLARNQNQDSIHSTEVVGTFGYLAPEYAEHGKVSTKTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWARPLLKDRNYPDLIDERILYSHDVHQLFWMVRIAEKCLSRDPQKRLNMNQVVDALTDIEQGRTCDTIIRDYSPARSDSFYGASDCDEYEDEMQGSFEIEGELQTHSSESTASNCLSQMMQMIVRQPPSPPVKSISSSCSSLFKFIEESTCHVEAQNEENSEITKSNEVLHNC* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0938 703 Pfam Protein tyrosine and serine/threonine kinase 329 586 IPR001245 GO:0004672|GO:0006468
Apr2g0938 703 SUPERFAMILY Protein kinase-like (PK-like) 310 592 IPR011009 -
Apr2g0938 703 PANTHER TYROSINE KINASE FAMILY PROTEIN 18 613 - -
Apr2g0938 703 SMART tyrkin_6 324 586 IPR020635 GO:0004713|GO:0006468
Apr2g0938 703 ProSiteProfiles Protein kinase domain profile. 324 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0938 703 Gene3D Transferase(Phosphotransferase) domain 1 399 602 - -
Apr2g0938 703 ProSitePatterns Tyrosine protein kinases specific active-site signature. 440 452 IPR008266 GO:0004672|GO:0006468
Apr2g0938 703 Gene3D Phosphorylase Kinase; domain 1 295 398 - -
Apr2g0938 703 PANTHER OS01G0253100 PROTEIN 18 613 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0938 Apr-Chr2 15236854 15243890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0938 291 610 Trihelix Transcription Factor Family AT5G38560 43.243 2.03e-75 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Apr2g0938 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0938 - - gsj:114417376 1022.31