Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0905 ATGGTGGAGATGTCTCTACAACATGAAAATTCTGATACCAATGATGTATCAGGATCAGGATCTTGCCTTTATGATCTCTTTTGTTCTGAAACACCAAGTATGAATACTCAAAGTCAAAGAGAACGATGGATGTCTTCTGGTCCACAAAAAAGGCTGGACAGTCTGACTCGTCAAGCTGGAAACAAGTTTTGTGCTGATTGTGGGTCATCAGAGCCAAAATGGGTGTCTTCAAGTCTTGGAGTATTTATTTGCATCAAATGCTCTGGTATACACAGAAGCCTTGGCGTCCATATATCAAAGGTTCTATCACTGAAGCTAGATGAATGGACAGACGAACAAGTTGATGCATTGGTGAAGTTGGGTGGAAATACGGTAATCAATAAGAAGTACGAAGCTTGCCTTCCAAATAACATGAGAAAACCAAAGCCAAATTCTTCTATTGAGGAGCGCTCAGAATTTATTAGGAGAAAATATGAGCTGCAACAGTTTTTGGATACTGAGGAGAATTTGTCTTGTCCCTTTGTACCTAATGCAAGAAGTTCATCATCTACGTATAACAATATCGCGATAGACAAAAAACATTATGATAAACAACCTACTAAAATTCGTATTGGGAATGCATTTCGAAACAGTTGGGGAAGAAAAGATTCTGAGCATAAGAGTTCAAAGAAAAGCAACTCATTGGCAGGTATGATTGAATTTGTTGGCTTGATCAAAGTCAACGTAGTTAAAGGCACTAACCTAGCTGTTCGGGATGTAATGACGAGTGACCCTTATGTCATTCTTTCTCTAGGTCACCAATCAATGAAGACGCGCGTCATAAAGAGTAATTTAAATCCGGTTTGGAACGAAATCCTAATGTTGTCAATTCCTGACAGTATTCCTCCTCTTAAAGTGGTTGTGTATGATAAGGACACTTTCTCTACCGATGATTTCATGGGTGAGGCTGAAATAGACATTCAACCTCTAGTTACAGCTGCAAAGGCATATGAGAAATCTTCAATCAACGAATCCATGCAGCTTGGAAAATTGATAGCAAGTGGTGACAATACTCTTGTAAAGGATGGTATTATCACTCTTGATGATGGAAAGGTAAGACAAGATATATCAGTAAGACTACAAAAAGTTGAAAGAGGTGTGCTAGAGATTGAGCTTGAGTGTGTTCCTTTAACTCAGTAA 1179 0.3868 MVEMSLQHENSDTNDVSGSGSCLYDLFCSETPSMNTQSQRERWMSSGPQKRLDSLTRQAGNKFCADCGSSEPKWVSSSLGVFICIKCSGIHRSLGVHISKVLSLKLDEWTDEQVDALVKLGGNTVINKKYEACLPNNMRKPKPNSSIEERSEFIRRKYELQQFLDTEENLSCPFVPNARSSSSTYNNIAIDKKHYDKQPTKIRIGNAFRNSWGRKDSEHKSSKKSNSLAGMIEFVGLIKVNVVKGTNLAVRDVMTSDPYVILSLGHQSMKTRVIKSNLNPVWNEILMLSIPDSIPPLKVVVYDKDTFSTDDFMGEAEIDIQPLVTAAKAYEKSSINESMQLGKLIASGDNTLVKDGIITLDDGKVRQDISVRLQKVERGVLEIELECVPLTQ* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0905 392 Pfam Putative GTPase activating protein for Arf 50 165 IPR001164 GO:0005096
Apr2g0905 392 CDD ArfGap 52 158 - -
Apr2g0905 392 Gene3D C2 domain 235 390 IPR035892 -
Apr2g0905 392 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 4 392 - -
Apr2g0905 392 SMART arf_gap_3 49 171 IPR001164 GO:0005096
Apr2g0905 392 SMART C2_3c 237 332 IPR000008 -
Apr2g0905 392 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 4 392 IPR044518 GO:0005096|GO:0005543
Apr2g0905 392 ProSiteProfiles C2 domain profile. 215 334 IPR000008 -
Apr2g0905 392 Pfam C2 domain 237 326 IPR000008 -
Apr2g0905 392 Gene3D Arf GTPase activating protein 30 171 IPR038508 -
Apr2g0905 392 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 235 327 IPR035892 -
Apr2g0905 392 ProSiteProfiles ARF GTPase-activating proteins domain profile. 49 171 IPR001164 GO:0005096
Apr2g0905 392 PRINTS HIV Rev interacting protein signature 61 80 IPR001164 GO:0005096
Apr2g0905 392 PRINTS HIV Rev interacting protein signature 80 97 IPR001164 GO:0005096
Apr2g0905 392 PRINTS HIV Rev interacting protein signature 101 122 IPR001164 GO:0005096
Apr2g0905 392 CDD C2_ArfGAP 235 379 - -
Apr2g0905 392 SUPERFAMILY ArfGap/RecO-like zinc finger 49 164 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0905 Apr-Chr2 14272464 14281844 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0905 2 14272464 14281844 Apr5g0945 5 13953205 13959554 PCT