Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0903 ATGCATTTTTTTTTGCAGATTTTAAGAGGGCTGCTGGTGGTTGGTTGTACAAGCATGGCATCAAGTAATCCATTCTTTGATGATATACGGAGCAGATCTAGTGTTGATCCTCCTCAAACTGAAGAATTGACAGAAATTGGTGAAGTTATAAATGAGCCTCCACCGACTACTCTTAAGCCTAATGGGACTGTTTCAAGCAGTGTTCGTGAGCTTTTAGAGTGCCCTGTGTGCTTGAATGCTATGTACCCTCCAATCCACCAGTGTTCAAATGGTCATACTTTATGCTCTGGTTGCAAACCCAGAGTCCATGACCGTTGCCCTACTTGTCGGCATGAGCTTGGCAACATCAGATGTCTGGCATTGGAGAAGGTGGCTGCATCTTTAGAACTTCCATGTAAATATCAAGGTTTTGGGTGCATGGGCATATACCCATATTACAGCAAGCTAAAACATGAATCTCAATGTGCATTTAGACCTTATAACTGTCCATATGCTGGTTCAGAATGTACTGTTTTGGGTGATATACCTTTCCTGGTGGCCCATCTGAAAGATGATCATAAAGTGGACATGCACAATGGTTGCACTTTTAATCATCGCTATGTCAAAACAAATCCACAAGAAGTTGAAAATGCCACGTGGATGCTAACGGTTTTCAGTTGCTTTGGCCAGTATTTTTGTCTACATTTTGAAGCTTTTCAGTTAGGAATGGCTCCCGTCTACATAGCATTTTTGCGGTTTATGGGGGACGATAATGAGGCAAAAAACTACACCTACAGTCTTGAGGTGGGTGGAAATGGGAGGAAGATGATTTGGCAGGGGGTGCCTAGAAGCATTAGAGACAACCACCGCAAGGTGCGTGACAGTTTTGATGGTCTCATCATTCAAAGGAACATGGCTCTGTTCTTTTCAGGGGGTGACCGGAAAGAGTTGAAACTACGAGTTACTGGGAGGATTTGGAAAGAACAGTGA 969 0.4324 MHFFLQILRGLLVVGCTSMASSNPFFDDIRSRSSVDPPQTEELTEIGEVINEPPPTTLKPNGTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHDRCPTCRHELGNIRCLALEKVAASLELPCKYQGFGCMGIYPYYSKLKHESQCAFRPYNCPYAGSECTVLGDIPFLVAHLKDDHKVDMHNGCTFNHRYVKTNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYTYSLEVGGNGRKMIWQGVPRSIRDNHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0903 322 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 182 315 IPR008974 GO:0005515
Apr2g0903 322 PANTHER E3 UBIQUITIN-PROTEIN LIGASE DIS1 25 322 - -
Apr2g0903 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 181 IPR013083 -
Apr2g0903 322 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 25 322 - -
Apr2g0903 322 ProSiteProfiles Zinc finger RING-type profile. 74 110 IPR001841 -
Apr2g0903 322 CDD RING-HC_SIAHs 72 110 - -
Apr2g0903 322 CDD Sina 188 316 - -
Apr2g0903 322 Pfam Seven in absentia protein family 116 315 IPR018121 GO:0005737|GO:0006511|GO:0007275
Apr2g0903 322 SUPERFAMILY RING/U-box 66 114 - -
Apr2g0903 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 125 IPR013083 -
Apr2g0903 322 ProSiteProfiles Zinc finger SIAH-type profile. 127 187 IPR013010 GO:0008270
Apr2g0903 322 SUPERFAMILY TRAF domain-like 127 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0903 Apr-Chr2 14251353 14256737 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0903 2 14251353 14256737 Apr2g0903 2 14251353 14256737 ECH
Apr2g0903 2 14251353 14256737 Apr5g0947 5 13969577 13979645 PCT