Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0757 ATGAGAACTAGAAGTGCTTCTTTCCTCTGTCTTATATCTCTTGCCACCATTCTGGGTAGTGTTACTGGAACTGCAACGTCAAGCGTGGAGCCAAGCCACTATGTTGCATCATTCAATAGGAGCCTTTTTCCTTCTGGTTTTGCATTTGGAATAGGTTCCTCCGCGTACCAGGCTGAAGGAGCAGCAAATGTAGATGGCAGGGGACCAAGTATATGGGACACTTACACTAGACAGCATTCTGAAAAAATTTGGGATCATAGCACCGGTGATGTTGGAGCTGATTTTTATCATCGGTACAAGAGTGACATAAAAGTGGTGAAAGAAATGGGGCTGGACTCCTTCAGATTCTCCATTTCTTGGACGAGAATCTTCCCCAAGGGCAAAGGAGACGTCAATCCCTTAGGGGTGAAATTCTACAACAATCTCATTGATGAGATCTTGTCAAATGGCTTAACACCTTTTGTCACCCTTTTCCACTGGGACTTCCCACAGGCTCTTGAAGATGAGTATGGAGGATTTCGTAGTCCTAAAGTAGTGGAGGATTTTCGTGGCTATGCGAACTTCTGCTTCAAGACCTTTGGTGATAGAGTGAAGCATTGGGTCACTCTGAATGAACCCTTGTCATATAGTCTCAATGGCTACAATGGTGGAACCTTTGCACCAGGTAGATGTTCCAAGTACGTTGCCAATTGCAGTGCCGGTGACTCATCCACTGAACCCTACATCGTTGGCCATAACTTATTACTAGCTCATGCGGCAGGGGCCACATTGTACAAGACCAAATACCAGGCTCATCAAAAAGGACAAATTGGGATTACCATACCGACTCACTTCTTTTTGCCAAAATCTAACACTGACCCCGATCACAAGGCTGCAAATCGAGCTCTGGAATTTTTCTTTGGTTGGTATGCCCTTCCTGTCACGTACGGTGACTATCCCGAGAGTATGAGATCTTCGGTTGGTGATAGGCTCCCAAAATTCACAAAAGCTGAAGCTGAAAGTCTCAAAGGTTCCGTTGATTTTCTTGGTGTGAATTATTACACCACATATTTTGCTGAACATGCTGCACCCGTCAGAACCAACAGGACCTTCTACACAGATATACTAGCCTCTCTCACCACTGAAAGGAACGGTCTAGCTGTTGGGACCCCGACTGCTTTGGATTGGCTCTTTATCTATCCAAAGGGACTTCATCAACTTATGGTATACATAAAGGATACATACAGGAATCCAATAATTTACATCACTGAAAATGGTGTTGCTGAAGCAAGGAATGACTCAATTCCAGTGAATGAAGCCCGCAAGGATGGTACCAGGATTAGATACCATGATAGCCATCTTAAATTCCTCCTTCAAGCGATCAAAGAGGGTGTTAACGTGAAGGGTTACTATGCATGGTCGTTTTCGGATAGCTTTGAATGGGATGCTGGTTACACAGTTCGATTTGGCCTAATATATGTGGATTACAAGAACAATTTGAGAAGATATCCCAAGTACTCTGCTTTTTGGCTCCAAAAATTCCTTCTCAAGTGA 1533 0.4403 MRTRSASFLCLISLATILGSVTGTATSSVEPSHYVASFNRSLFPSGFAFGIGSSAYQAEGAANVDGRGPSIWDTYTRQHSEKIWDHSTGDVGADFYHRYKSDIKVVKEMGLDSFRFSISWTRIFPKGKGDVNPLGVKFYNNLIDEILSNGLTPFVTLFHWDFPQALEDEYGGFRSPKVVEDFRGYANFCFKTFGDRVKHWVTLNEPLSYSLNGYNGGTFAPGRCSKYVANCSAGDSSTEPYIVGHNLLLAHAAGATLYKTKYQAHQKGQIGITIPTHFFLPKSNTDPDHKAANRALEFFFGWYALPVTYGDYPESMRSSVGDRLPKFTKAEAESLKGSVDFLGVNYYTTYFAEHAAPVRTNRTFYTDILASLTTERNGLAVGTPTALDWLFIYPKGLHQLMVYIKDTYRNPIIYITENGVAEARNDSIPVNEARKDGTRIRYHDSHLKFLLQAIKEGVNVKGYYAWSFSDSFEWDAGYTVRFGLIYVDYKNNLRRYPKYSAFWLQKFLLK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0757 510 ProSitePatterns Glycosyl hydrolases family 1 active site. 413 421 IPR018120 -
Apr2g0757 510 Gene3D Glycosidases 23 510 - -
Apr2g0757 510 Pfam Glycosyl hydrolase family 1 41 507 IPR001360 GO:0004553|GO:0005975
Apr2g0757 510 SUPERFAMILY (Trans)glycosidases 34 508 IPR017853 -
Apr2g0757 510 PANTHER BETA-GLUCOSIDASE 17 9 509 - -
Apr2g0757 510 PRINTS Glycosyl hydrolase family 1 signature 338 352 IPR001360 GO:0004553|GO:0005975
Apr2g0757 510 PRINTS Glycosyl hydrolase family 1 signature 413 421 IPR001360 GO:0004553|GO:0005975
Apr2g0757 510 PRINTS Glycosyl hydrolase family 1 signature 436 447 IPR001360 GO:0004553|GO:0005975
Apr2g0757 510 PRINTS Glycosyl hydrolase family 1 signature 457 474 IPR001360 GO:0004553|GO:0005975
Apr2g0757 510 PRINTS Glycosyl hydrolase family 1 signature 481 493 IPR001360 GO:0004553|GO:0005975
Apr2g0757 510 PANTHER GLYCOSYL HYDROLASE 9 509 IPR001360 GO:0004553|GO:0005975
Apr2g0757 510 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 47 61 IPR033132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0757 Apr-Chr2 10162660 10167794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0757 1 508 Glycoside Hydrolase AT5G44640 48.828 8.83e-180 513
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0757 2 10162660 10167794 Apr2g0757 2 10162660 10167794 ECH
Apr2g0757 2 10162660 10167794 Apr5g0771 5 10939844 10947792 PCT