Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0678 ATGTCTCTCTCACGCTTCATCACTCCTCTCTGCTGCACTTCTGCAACTTCAGATTCTTTGGTGACTGCATCAAATGTAAAGAAGGAAATGAACAGTACAGCCTTGAGCCTTGAAGACTCTAAAGAAAGAATCAGGAAAATGTTCAACAAGGTTGAACTTTCTGTTTCTTCCTATGACACAGCTTGGTTGGCAATGGTTTCCTCGCCAACTTCTCCTCATACCCCATTTTTCCCTCAATGCTTGAATTGGTTGTTGGACAATCAACTCTTTGATGGCTCGTGGGCTCTTCCTGGTCACCATCCATTATTGATGAATGATGCTCTCTTATCCACCTTATCATGTATCCTTGCATTAAAGCAATGGGGTGTTGGTGAAGATCAAATTAACAGGGGTCTTCAGTTTATTGAGTCAAACATTACTTCAATCAATGATGAAAAGCAACACCCTCCAATAGGATTTGATATACTTTTTCCTTCTTTGATTGAATATGCACAAAATTTGGGCATTAACCCTCCAATTGGCGCCACTACCTTGGAAGCAATGTTCCAAAAGAGAGAGAGAGAATTTCAAAGAGGCAGTCAAAGCAATTCAGAAGGGTGGAGAGCATATCTAGCATATATTTCAGAAGGAATGCGGAAATCAAAGGACTGGCAAACAATCTTGAAGTATCAAAGAAAGAATGGATCTTTGTTTAATTCACCTGCTACAACAGCAGCTGTTTTTCAGCACCTTAAGAACGCTGACTGTCTTAATTACCTCCAATCTGTATTAGAGAAGTTTGGGAGTGCAGTTCCAACAGTTTACCCTCTTGATATATATGCCCGTCTCTATATGATTGATAGTCTTGAAAGGTTGGGTATCAATCATCACTTCAAAGAGGAAATTCAAAGTGTATTGGATGAAACGTACAGATATTGGCTACAAGGAGAGGAAGACATATTCTTAGACCCCACCATTTGTGCAATGGCATTTCGTATGTTGCGCCTCAATGGTTATGATGTATCTTCAGATCCATTTTATCAATATTCCGAAGATAAATTTGCAAATTCCTTGAAAGGGTACTTGAAGGATGTTGGTGCAGTTTTAGAGCTATATAAGGCTTCACAAGTCATGGTACATCCAAATGAATCAGTTTTGGTGAGACAAAGTTTGTGGACGAGACATCTTCTGAAGCAGGATTCATCCCCTTTCCGATTATATGCTGATAAACTTCAAAGTTATGTTGACCAAGAGGTCAATGATGTTCTTAATTTTCCTTATCATGCAAATTTGGAGCGTTTATTAAACAGGAGATCAATCGAGCATTACAATGTAGAGGAAGCAAGGAGTTTAAAAACATCATATAGATCTTGCAATCTTGCAAACCGAGAAATTCTAAAGCTAGCAGTGGAAGACTTCAATATCTGCCAATCAATACACAGTGAAGAATTGAAACAACTGTCCAGGTGGGTTGTTGAGAACAGACTAGACAAACTAAATTTTGCAAGGCAGAAACTGGCCTACTGTTACTTCTCCAGTGCAGCTACTCTTTTCCCCCCTGAACTTTCTGATGCTCGCATATCATGGGCTAAAAATGGGGTGCTCACAACAGTTGTTGATGATTTCTTTGATGTTGGAGGTTCTGAAAAGGAGCAAGTAGACCTTATTCAACTGGTTGAGGAGTGGGATGTAGATATCAATACTGTTAACTGTTCTGAGACAGTTAAGATAATATTTTCTGCAATTCACAGCACAGTTTGTGAGATTGGAGAGAGATCAGTCAAGCGACAAGGACATAATGTGAAAAACAATGTTATCAAGATTTGGTTAAATTTGATCCAGTCTATGTTTAGAGAAGCTGAGTGGTTGAGAACCAAGACTGTGCCAACAATCGACGATTATATGGACAATGCTTACATCTCATTTGCATTAGGTCCAATTGTCCTTCCAGCCCTCTATCTTGTTGGACCTAGGCTTTCCGATGAAGTTGCTGAAAAGCATGAGTTGAATTGTCTGTATAAGCTCATGAGCACTTGCGGGCGTCTTCTTAATGACATTCACAGTTTTAAGAGAGAATCCGAGGAAGGGAAATTGAATGCGGTGACTTTGCGTATAGCTCGTGGCGGTGGAGTTGCAAGTGCAGAAGGTGCCATTGAAGAGATGAAAGTTATTGCTGAGGAAAAGAGAAGAGAACTCCTGAGATTAATTTTGCAGGAAAAAGGAAGCTTAGTTCCAAGAGATTGCAAGGATTTGTTTTGGAAAATGATAAAAGTGTTGCACCTATTTTACATGAAGGATGATGGATTTACTTCACATGACATGTACTCTAGTGTGAATGCAGTAATTAAAGATCCTGTGGTCCTTAATGAATTGTAG 2355 0.3945 MSLSRFITPLCCTSATSDSLVTASNVKKEMNSTALSLEDSKERIRKMFNKVELSVSSYDTAWLAMVSSPTSPHTPFFPQCLNWLLDNQLFDGSWALPGHHPLLMNDALLSTLSCILALKQWGVGEDQINRGLQFIESNITSINDEKQHPPIGFDILFPSLIEYAQNLGINPPIGATTLEAMFQKREREFQRGSQSNSEGWRAYLAYISEGMRKSKDWQTILKYQRKNGSLFNSPATTAAVFQHLKNADCLNYLQSVLEKFGSAVPTVYPLDIYARLYMIDSLERLGINHHFKEEIQSVLDETYRYWLQGEEDIFLDPTICAMAFRMLRLNGYDVSSDPFYQYSEDKFANSLKGYLKDVGAVLELYKASQVMVHPNESVLVRQSLWTRHLLKQDSSPFRLYADKLQSYVDQEVNDVLNFPYHANLERLLNRRSIEHYNVEEARSLKTSYRSCNLANREILKLAVEDFNICQSIHSEELKQLSRWVVENRLDKLNFARQKLAYCYFSSAATLFPPELSDARISWAKNGVLTTVVDDFFDVGGSEKEQVDLIQLVEEWDVDINTVNCSETVKIIFSAIHSTVCEIGERSVKRQGHNVKNNVIKIWLNLIQSMFREAEWLRTKTVPTIDDYMDNAYISFALGPIVLPALYLVGPRLSDEVAEKHELNCLYKLMSTCGRLLNDIHSFKRESEEGKLNAVTLRIARGGGVASAEGAIEEMKVIAEEKRRELLRLILQEKGSLVPRDCKDLFWKMIKVLHLFYMKDDGFTSHDMYSSVNAVIKDPVVLNEL* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0678 784 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 47 777 - -
Apr2g0678 784 Gene3D Farnesyl Diphosphate Synthase 469 783 IPR008949 -
Apr2g0678 784 PANTHER ENT-KAUR-16-ENE SYNTHASE, CHLOROPLASTIC 47 777 - -
Apr2g0678 784 SUPERFAMILY Terpenoid synthases 455 779 IPR008949 -
Apr2g0678 784 Coils Coil 704 724 - -
Apr2g0678 784 Pfam Terpene synthase, N-terminal domain 216 397 IPR001906 GO:0010333|GO:0016829
Apr2g0678 784 CDD Terpene_cyclase_plant_C1 254 778 IPR044814 GO:0010333|GO:0016102
Apr2g0678 784 SFLD Terpene Cyclase Like 1 N-term 23 449 - -
Apr2g0678 784 Gene3D - 46 466 IPR036965 GO:0010333|GO:0016829
Apr2g0678 784 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 226 439 IPR008930 -
Apr2g0678 784 Gene3D - 54 257 - -
Apr2g0678 784 Pfam Terpene synthase family, metal binding domain 459 724 IPR005630 GO:0000287|GO:0010333|GO:0016829
Apr2g0678 784 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 57 248 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0678 Apr-Chr2 8259229 8264611 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0678 2 8259229 8264611 Apr2g0678 2 8259229 8264611 ECH