Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0658 ATGGCCTCAGCCGCAGCACCCACCACCTTCTCCCTCCTCCACTCCACCACTGCCTCCTCCTCCTCCACCACCTCTTCCTCCTCCACCCGCCTCCACTTCTCCTCCACCCTCCGCGTCCGCCCGCTCCGCCGCAGCCTGGGGTTCTCTGCAGCGGACCCCCTGCTTGCGGCGACGGTGGCGGCGAGAGTGGGTGCAGTTCGTGGAGGGAAGGGAGCGAGAGCAGTGGTATCGATGGCGAAGAAGAGTGTGGGCGATTTGAGTGCTTCGGAGTTGAAAGGAAAGAGAGTGTTCGTTAGAGCTGACCTCAACGTTCCGTTAGACGACAACCAGAACATCACAGACGACACTAGGATCCGCGCCGCTGTTCCCACCATCAAACACCTTATTCAATACGGCGCCAAAGTCATCCTCTCCAGCCACTTGGGGCGACCAAAGGGTGTCACTCCCAAATACAGCTTGGCACCTCTTGTACCCCGGCTTACTGAACTAATTGGTGTTGAGGTTGTCAAGGCTGACGACAGTATTGGTCCAGAAGTCGAGAAGCTGGTGACTTCCCTTCCGGATGGAGGTGTGCTTCTTCTAGAAAATGTGAGGTTTTACAAGGAGGAAGAAAAGAATGATCCTGAACATGCCAAAAAGCTTGCCTCTCTAGCTGATCTGTATGTGAATGATGCATTTGGTACTGCTCATAGGGCACATGCATCAACAGAGGGGGTCACTAAATACCTGAAGCCATCTGTTGCTGGTTTTCTTTTGCAAAAGGAACTTGATTACCTTGTTGGGGCAGTATCAAACCCGAAAAGGCCATTTGCTGCCATTGTTGGTGGTTCCAAGGTCTCATCTAAAATTGGAGTGATCGAATCACTTCTAGAAAAAGTTGACATCCTTCTTCTTGGTGGAGGTATGATCTTCACATTTTACAAGGCACAAGGTCTTTCAGTGGGTTCATCCCTTGTAGAGGAAGATAAGTTGGATCTTGCTACATCACTACTTGCAAAAGCCAAGGCAAAGGGGGTTTCCCTGTTGTTACCAAGTGACGTGGTGATTGCAGACAAATTTGCTCCTGATGCAAACAGCAAGGTGGTGCCAGCATCTGCCATCCCTGATGGCTGGATGGGATTGGATATTGGTCCAGATTCTGTCAAATCATTCAGTGAAGCATTGGATACTACCAAAACCATCATATGGAATGGACCAATGGGAGTGTTTGAGTTTGACAAGTTTGCTGTTGGGACAGAGGCTATTGCAAAGAAGCTGGCTGACCTAAGTGGAAAGGGTGTGACCACAATTATTGGAGGAGGAGATTCTGTTGCAGCAGTGGAGAAAGTAGGAGTTGCTAATGTCATGAGTCACATTTCTACTGGTGGTGGTGCCAGTTTGGAGTTACTGGAAGGCAAAGAGCTTCCAGGAGTCCTTGCTCTTGATGAAGCCACACCAGTTGCTGTGTAA 1449 0.5024 MASAAAPTTFSLLHSTTASSSSTTSSSSTRLHFSSTLRVRPLRRSLGFSAADPLLAATVAARVGAVRGGKGARAVVSMAKKSVGDLSASELKGKRVFVRADLNVPLDDNQNITDDTRIRAAVPTIKHLIQYGAKVILSSHLGRPKGVTPKYSLAPLVPRLTELIGVEVVKADDSIGPEVEKLVTSLPDGGVLLLENVRFYKEEEKNDPEHAKKLASLADLYVNDAFGTAHRAHASTEGVTKYLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLDLATSLLAKAKAKGVSLLLPSDVVIADKFAPDANSKVVPASAIPDGWMGLDIGPDSVKSFSEALDTTKTIIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVANVMSHISTGGGASLELLEGKELPGVLALDEATPVAV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0658 482 ProSitePatterns Phosphoglycerate kinase signature. 95 105 IPR015911 GO:0004618|GO:0006096
Apr2g0658 482 Pfam Phosphoglycerate kinase 89 466 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PRINTS Phosphoglycerate kinase family signature 90 106 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PRINTS Phosphoglycerate kinase family signature 112 134 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PRINTS Phosphoglycerate kinase family signature 189 204 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PRINTS Phosphoglycerate kinase family signature 217 239 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PRINTS Phosphoglycerate kinase family signature 248 270 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PRINTS Phosphoglycerate kinase family signature 271 290 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PRINTS Phosphoglycerate kinase family signature 393 418 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PRINTS Phosphoglycerate kinase family signature 429 440 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PRINTS Phosphoglycerate kinase family signature 452 469 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 SUPERFAMILY Phosphoglycerate kinase 86 476 IPR036043 GO:0004618|GO:0006096
Apr2g0658 482 Gene3D - 48 149 IPR015824 GO:0004618|GO:0006096
Apr2g0658 482 Gene3D - 151 477 IPR015824 GO:0004618|GO:0006096
Apr2g0658 482 Gene3D - 265 452 IPR015824 GO:0004618|GO:0006096
Apr2g0658 482 PANTHER PHOSPHOGLYCERATE KINASE 1 477 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PANTHER PHOSPHOGLYCERATE KINASE 1 477 - -
Apr2g0658 482 Hamap Phosphoglycerate kinase [pgk]. 85 476 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 CDD Phosphoglycerate_kinase 91 476 IPR001576 GO:0004618|GO:0006096
Apr2g0658 482 PIRSF Pgk 76 482 IPR001576 GO:0004618|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0658 Apr-Chr2 7813441 7816724 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0658 2 7813441 7816724 Apr2g0658 2 7813441 7816724 ECH