Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0618 ATGAAGGAGAGTGGTAGAAAACAAGGTGCAATGTCGCCATGTGCAGCATGCAAGCTTCTTCGAAGAAGATGCTCCCGGGATTGTGTATTTGCTCCTTATTTTCCTGCAGATGAACCCCAGAAGTTTGGTAGTGTGCACAAGGTTTTTGGGGCTAGCAATGTGAACAAAATGTTACAGGAATTACCAGAGCATCAAAGAAGTGATGCTGTTAGTTCTATGGTATATGAAGCCAATGCTAGGGTGAGGGACCCAGTGTATGGATGTGTGGGAGCCATATCTTCTCTTCAACAACAAGTTGATGTGCTTCAAACACAATTAGCACTGGCACAAGCAGAAGTTGTGCACATGAGAATGCGCCAATTGTCAACACCATCAGATCAACAACCACCATCAATGCCTCCTGAAGCCTCCAATTCATCATCAGAACACTTATATCAATCAAGCAGGCTCTTGTCTTCACAAACCAAGTCCCTTTTTGGCATGGACATGGTCGTTGATCAGGCCAACATGGGCCAATCCTTGTGGTTATACTAG 534 0.4476 MKESGRKQGAMSPCAACKLLRRRCSRDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMRMRQLSTPSDQQPPSMPPEASNSSSEHLYQSSRLLSSQTKSLFGMDMVVDQANMGQSLWLY* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0618 177 Coils Coil 92 112 - -
Apr2g0618 177 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Apr2g0618 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 174 - -
Apr2g0618 177 MobiDBLite consensus disorder prediction 121 147 - -
Apr2g0618 177 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Apr2g0618 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0618 Apr-Chr2 7226263 7230256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0618 1 175 AS2 family AT1G31320 67.429 1.84e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr2g0618 LOB 4.2e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0618 2 7226263 7230256 Apr2g0618 2 7226263 7230256 ECH