Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0603 ATGGCCGTTGAGGCTCACCAACTCAACCCTTTCCCCTCTCAACTCATATGCAACCGGGAAATAATGAATCCCATTGAGGCCAATCTGTATAACACCCACATCGATTATTCTTCTCTTCTTCCATTCTCGGCCACTACTGCCTTAACTGAAGCATCGCTTCCACCGCCGCCGTATAACTCTTTTGCCGCCGATTCGTTTCTGCGAAAACCCGCCGTGAAATCTGAGAGTGGCCTTACTTACAACAATAACGACAACAATTTTGTTCCCATGTTGCGAAAGCGTTACATAGACAACTCCAATTCCATCAACCACTTCTCTTTACCATTTTATTCAGACTCCTACTCTTTTCTCGGTCAAGATATTTCTGTTCAGATGCAACAACAACAACTAGCCATCGATCAACTCATTATGCAACGAATGGAAAAAGTTAGAGTGGAGATAAGAGAAAAGCGGAAGAGGCATGCGAGGAAGATGATTGAAGAGGTTGAAGACATGGTGATGAAGAAGCTGAAGGCAAAAGAAGAAGAGATAGAGAAGATAGGGAAATTAAATTGGGCTTTGGAAGAAAGAGTGAAGGCTCTGTGCATAGAGAATCAGATATGGCGTGATTTAGCGCAATCTAACGAAGCCACCGCCAATGCCTTGCGCACCAATCTGGAGCAAGTGTTGGCGCAGCGCGGCGGAGTCATCGACGACGAGGGGGTCACCGTGTGCCCCGCCGTAGTGATGGACGACGCACAGTCTTGTTGCGGCAGCACTGGGGATAATGAGAAAGAGGTGTGGCGCAAGTTAGCAGGATGCGCAGGGGTGAAGGATAAGGATGAATATGAAGATGATGGTTGTACTAGGACGAAAATGGCGAACAACGGGATCAGCAGGCTATGCAGGAACTGTATGAAAGTAGAGTCTTGTGTGCTGATTTTGCCGTGTAGACATTTGTGTGTGTGTACCGGGTGTGGGTCTACTCTGCACACTTGTCCCATATGTAAATCCTTCAAGACTGCTAGCGTTCATGTTAACATGTCCTAA 1029 0.4684 MAVEAHQLNPFPSQLICNREIMNPIEANLYNTHIDYSSLLPFSATTALTEASLPPPPYNSFAADSFLRKPAVKSESGLTYNNNDNNFVPMLRKRYIDNSNSINHFSLPFYSDSYSFLGQDISVQMQQQQLAIDQLIMQRMEKVRVEIREKRKRHARKMIEEVEDMVMKKLKAKEEEIEKIGKLNWALEERVKALCIENQIWRDLAQSNEATANALRTNLEQVLAQRGGVIDDEGVTVCPAVVMDDAQSCCGSTGDNEKEVWRKLAGCAGVKDKDEYEDDGCTRTKMANNGISRLCRNCMKVESCVLILPCRHLCVCTGCGSTLHTCPICKSFKTASVHVNMS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0603 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 271 342 IPR013083 -
Apr2g0603 342 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 341 - -
Apr2g0603 342 Coils Coil 170 190 - -
Apr2g0603 342 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 341 IPR017066 -
Apr2g0603 342 Pfam Zinc finger, C3HC4 type (RING finger) 293 331 - -
Apr2g0603 342 Coils Coil 137 157 - -
Apr2g0603 342 ProSiteProfiles Zinc finger RING-type profile. 295 330 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0603 Apr-Chr2 7071681 7074353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0603 111 331 Miscellaneous Gene Families AT2G21380 23.246 1.85e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0603 2 7071681 7074353 Apr2g0603 2 7071681 7074353 ECH