Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0572 ATGCTAATATTAGTGGGAAACGTGCAAGGAACAATGGGTTCTCTTGCTTCCCCTGTGAGCTTGGGGAGCCTCATGGGTGTGAGTTCCTCTGGAAGGTCTCATTCTGCGGTGAGGAGAGTCTCTCTTTCTAGAGGGAAGTGTGTGGTGAACAGAAGATGGCATTGTGTGTCATTGTCTGTGTGTAGATATTCAGTGACCACAACTGATTTTGTTGCTGACCAAGGAAATTCAGTGCCCCTTGATTCTAACAGTAGTAGTAGTAGTAAAGGTGGGGATGATAGTGCTGGTTTTGTGCTTAAGCCACCTCCTAAGCCTGTGTTTAAGTCCTCAGACAATAAGGGTGACCCCATTTTAGGCTCCTCAAGGACTTTTGGGGGCACTGATGCTGTGGAAGAGAGGAATAAAGTGATTGAGTCACTTGGAGAGGTGTTGGAGAAGGCTGAAAAGCTGGGAAATTCGAAGTTGAATGGTGAAAGAAATAACGGTTCGGTAAAAAAACCAGAAAGACCTAATACAGATGTTAATCCTAAGGTTGATAAACCGGTAAATTCCACGAAAATGCAGAAGTCTAAGACCTTGAAGAGTGTGTGGCGTAAAGGGGACACAGTTGCAGCTGTGGAGAAGGTTGTGAAGGAAGTACCGAAGCCTAATTACAAGAATGAAGGGGAGAAGTCTCAAACGAAGGGAGGGGAGAAGGTAATGTCTCAGTCTCGTCCTCCTCAGCGGCCTTTGAGACCTCAACCCATGTTACAAGCTAAACCTTCTATAGCTCCGCCACCCATAAAAAAACCTGTTGTCTTGAGGAATCAGGGTGCAGCTGAAACGTCTGTGAAATCTAAAGAAAGGAAGCAACCAATCTTGGTTGATAAGTTTGCTGCCAAGAAGCCAGTAGTTGATCCTCTAATTGCTCAAGCGGTTATAGCCCCTCCAAAACCAGGAAAGGCGCCTCCTCCTGGAAAGTTCAAAGATGATTACCGGAGGAGAGGTGCTCCGGCTGGCAGAAGGCGATTAGTGGATGATAATGATGTGATTCATGATGAGGACACATCAGAACTCAATGTCTCTATTCCCGGTGCTGCAACAGCAAGAAAAGGAAGAAAATGGAGTAAAGCAAGTCGAAAGGCAGCAAGACTCCAGGCTGCCAAGGATGCAGCTCCTGTCAAAGTAGAAATTCTAGAGGTTGGTAACGAAGGTATGCTAGTGGAGGAATTAGCCTACAATTTGGCAATCAGTGAAGGAAAAATCCTGGGTTATCTATACTCCAAGGGGATCAAACCGGATGGGGTACAAACACTAGACAAAGATATGGTGAAGATGGTTTGTAAAGAGTATGATGTGGAAGTCATAGATGCTGATCCCATCAAAGTTGAAGGTTTAGTGAAGAAAAGGGATATTCTGGATGAAGACGACCTTGACAAACTCAAAGACAGGCCTCCTGTCATTACTATTATGGGCCATGTGGATCATGGCAAGACAACTCTTTTGGATTATATACGGAAGAGCAAGGTAGCTGCTTCTGAAGCTGGTGGGATAACACAGGGAATTGGGGCCTACAAAGTGCAAGTACCTGTTGATGGCAAACAGCTGCCCTGTGTTTTCCTTGACACTCCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGTGGGGCAAGTGTAACAGACATTGCTATTATTGTTGTGGCTGCGGATGATGGAATTCGTCCTCAAACAAATGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTTCCCATGATCATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGAACGAGTCATGCAAGAGCTTTCTTCAATTGGTTTAATGCCTGAAGACTGGGGTGGTGACATCCCAATGGTTCAGATAAGTGCTCTTAAAGGGAAGAACATAGATGATCTCTTGGAAACTGTTATGCTTGTTGCTGAGTTGCAAGAGCTGAAAGCGAATCCTGATAGAAGTGCGAAGGGCACAGTCATTGAGGCAGGGCTAGATAAATCAAAAGGACCATTTGCTACATTTATTGTGCAGAATGGCACTCTTAGAAGGGGAGATGTGGTAGTTTGTGGAGAAGCTTTTGGAAAGGTGCGGGCTTTATTTGATGATGGTGGAAAACGGGTCAATGAAGCTATGCCCTCTATACCTGTACAGGTTATTGGATTGAATAATGTTCCAATTGCTGGTGATGAATTTGAGGTTGTTGAATCCCTTGATACTGCTCGTGAAAAGGCAGAGGCCCGTGCGGAGTCATTACGAAATGAGCGCATTACAGCAAAGGCAGGGGATGGCAAGATCACCCTTTCTTCCTTAGCTTCTGCAGTTTCAGCAGGGAAGCTTTCTGGGCTAGACTTGCACCAACTAAATATAATTTTGAAGGTTGATCTTCAGGGATCTATTGAAGCTGTCAGAAAAGCTCTGCAGGTGCTACCACAAGATAATGTCACACTGAAGTTTTTGTTGGAAGCAACAGGTGATGTAAGCACAAGTGACGTGGACCTAGCAGTTGCAAGCAAAGCTATCATTTTGGGATTTAATGTCAAAGCACCAGGCTCTGTGAAAAGTTATGCAGACAATAAAGCTGTTGAGATTAGATTATATAGAGTTATTTATGAATTAATTGATGATGTAAGGAATGCAATGGAAGGGCTCCTGGAACCTGTTGAGGAACAAGTAACAATTGGCTCAGCAGAAGTACGGGCCACATTCAGCAGTGGTAGTGGTCGTGTAGCTGGATGCATGGTTACAGAGGGAAAGGTACTAAAAGGCTGCGGTATTCGAGTCCTTCGGAAGGGAAAAGTAGTTCATGTTGGTATTGTTGATTCTTTGAGACGGGTGAAGGAGATTGTTAAAGAGGTAAATGCTGGTCTTGAGTGTGGAGTTGGATTAGAAGACTTTGATGATTGGGAAGAGGGTGATATTCTTGAAGCCTTCAACACAGTTCAGAAGAAGAGGACCCTTGAAGAGGCCTCAGCATCAATGGCAGCTGCTGTGGAGGGAGTGGGAGTTTAA 3012 0.4475 MLILVGNVQGTMGSLASPVSLGSLMGVSSSGRSHSAVRRVSLSRGKCVVNRRWHCVSLSVCRYSVTTTDFVADQGNSVPLDSNSSSSSKGGDDSAGFVLKPPPKPVFKSSDNKGDPILGSSRTFGGTDAVEERNKVIESLGEVLEKAEKLGNSKLNGERNNGSVKKPERPNTDVNPKVDKPVNSTKMQKSKTLKSVWRKGDTVAAVEKVVKEVPKPNYKNEGEKSQTKGGEKVMSQSRPPQRPLRPQPMLQAKPSIAPPPIKKPVVLRNQGAAETSVKSKERKQPILVDKFAAKKPVVDPLIAQAVIAPPKPGKAPPPGKFKDDYRRRGAPAGRRRLVDDNDVIHDEDTSELNVSIPGAATARKGRKWSKASRKAARLQAAKDAAPVKVEILEVGNEGMLVEELAYNLAISEGKILGYLYSKGIKPDGVQTLDKDMVKMVCKEYDVEVIDADPIKVEGLVKKRDILDEDDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPVDGKQLPCVFLDTPGHEAFGAMRARGASVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPMIIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGKNIDDLLETVMLVAELQELKANPDRSAKGTVIEAGLDKSKGPFATFIVQNGTLRRGDVVVCGEAFGKVRALFDDGGKRVNEAMPSIPVQVIGLNNVPIAGDEFEVVESLDTAREKAEARAESLRNERITAKAGDGKITLSSLASAVSAGKLSGLDLHQLNIILKVDLQGSIEAVRKALQVLPQDNVTLKFLLEATGDVSTSDVDLAVASKAIILGFNVKAPGSVKSYADNKAVEIRLYRVIYELIDDVRNAMEGLLEPVEEQVTIGSAEVRATFSSGSGRVAGCMVTEGKVLKGCGIRVLRKGKVVHVGIVDSLRRVKEIVKEVNAGLECGVGLEDFDDWEEGDILEAFNTVQKKRTLEEASASMAAAVEGVGV* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0572 1003 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 43 995 IPR015760 -
Apr2g0572 1003 MobiDBLite consensus disorder prediction 151 196 - -
Apr2g0572 1003 TIGRFAM IF-2: translation initiation factor IF-2 397 987 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Apr2g0572 1003 Pfam Elongation factor Tu GTP binding domain 481 641 IPR000795 GO:0003924|GO:0005525
Apr2g0572 1003 CDD mtIF2_IVc 895 977 - -
Apr2g0572 1003 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 43 995 - -
Apr2g0572 1003 SUPERFAMILY Translation proteins 652 736 IPR009000 -
Apr2g0572 1003 MobiDBLite consensus disorder prediction 241 261 - -
Apr2g0572 1003 Gene3D Translation factors 652 767 - -
Apr2g0572 1003 SUPERFAMILY Translation proteins 891 985 IPR009000 -
Apr2g0572 1003 MobiDBLite consensus disorder prediction 212 263 - -
Apr2g0572 1003 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 783 895 IPR036925 -
Apr2g0572 1003 MobiDBLite consensus disorder prediction 212 228 - -
Apr2g0572 1003 MobiDBLite consensus disorder prediction 161 175 - -
Apr2g0572 1003 MobiDBLite consensus disorder prediction 177 191 - -
Apr2g0572 1003 Gene3D - 784 889 IPR036925 -
Apr2g0572 1003 Coils Coil 735 762 - -
Apr2g0572 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 470 652 IPR027417 -
Apr2g0572 1003 MobiDBLite consensus disorder prediction 74 92 - -
Apr2g0572 1003 Gene3D - 473 651 IPR027417 -
Apr2g0572 1003 MobiDBLite consensus disorder prediction 308 327 - -
Apr2g0572 1003 Pfam Translation-initiation factor 2 784 877 IPR023115 -
Apr2g0572 1003 Hamap Translation initiation factor IF-2 [infB]. 7 985 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Apr2g0572 1003 CDD IF2_eIF5B 479 645 - -
Apr2g0572 1003 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 476 649 IPR000795 GO:0003924|GO:0005525
Apr2g0572 1003 Gene3D Translation factors 890 986 - -
Apr2g0572 1003 MobiDBLite consensus disorder prediction 74 130 - -
Apr2g0572 1003 PRINTS GTP-binding elongation factor signature 480 493 IPR000795 GO:0003924|GO:0005525
Apr2g0572 1003 PRINTS GTP-binding elongation factor signature 532 542 IPR000795 GO:0003924|GO:0005525
Apr2g0572 1003 PRINTS GTP-binding elongation factor signature 548 559 IPR000795 GO:0003924|GO:0005525
Apr2g0572 1003 PRINTS GTP-binding elongation factor signature 584 593 IPR000795 GO:0003924|GO:0005525
Apr2g0572 1003 TIGRFAM small_GTP: small GTP-binding protein domain 478 639 IPR005225 GO:0005525
Apr2g0572 1003 ProSitePatterns Initiation factor 2 signature. 938 960 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Apr2g0572 1003 CDD IF2_mtIF2_II 656 750 IPR044145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0572 Apr-Chr2 6743493 6752259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0572 455 875 Eukaryotic Initiation Factors Gene Family AT1G76810 29.303 6.73e-29 123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0572 2 6743493 6752259 Apr2g0572 2 6743493 6752259 ECH