Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0562 ATGGCTGATGAAGTTGTTCTTCTAGATTTTTGGCCAAGTCCTTTTGGGATGAGGGTCAGAATTGCACTAGCTGAAAAGGGTGTCAAGTATGAGTACAAAGAAGAGGACTTGAAGAACAAGAGTCCTTTGCTCCTCCAAATGAACCCTGTTCACAAGAAAATCCCTGTTCTTATCCACAACGGCAAGCCCATTTGTGAGTCTCTCATTGCTGTTCAGTACATTGAGGAGGTTTGGAAGGACAAATCTCCATTGTTGCCTTCTGACCCTTACCAGAGAGCTCAGGCTAGATTCTGGGCTGATTATGTTGACAAGAAGGTATATGACCTTGGAAGGAAGATTTGGAGCGCGAAAGGAGAGGAAAAAGAGACTGCCAAGAAGGAGTTCATTGAAGTCCTTAAATTGTTGGAGGAACAGTTAGGTGACAAGGCTTATTTTGGAGGAGACAATCTGGGATTTGTGGATGTATCACTTATTCCATTCTACACTTGGTTTAAAGCGTATGAGACTTTTGGCACCCTCAACATAGAGAGTGAGTGCCCCAAGTTTATTGCTTGGGCCAAGAGGTGCATGCAGAAGGAGAGTGTTTCCAAGTCTCTTCCTGATCAGCATAAGGTCTATGAGTTCATTGTGGAGATAAGAAAGAAGTTAGGCATTGAGTAG 660 0.4348 MADEVVLLDFWPSPFGMRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGKPICESLIAVQYIEEVWKDKSPLLPSDPYQRAQARFWADYVDKKVYDLGRKIWSAKGEEKETAKKEFIEVLKLLEEQLGDKAYFGGDNLGFVDVSLIPFYTWFKAYETFGTLNIESECPKFIAWAKRCMQKESVSKSLPDQHKVYEFIVEIRKKLGIE* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0562 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Apr2g0562 219 CDD GST_N_Tau 5 78 - -
Apr2g0562 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 214 IPR045073 -
Apr2g0562 219 Gene3D Glutaredoxin 1 87 - -
Apr2g0562 219 PANTHER S-TRANSFERASE TAU 22, PUTATIVE-RELATED 4 214 - -
Apr2g0562 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Apr2g0562 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Apr2g0562 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Apr2g0562 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Apr2g0562 219 Pfam Glutathione S-transferase, N-terminal domain 6 75 IPR004045 -
Apr2g0562 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Apr2g0562 219 Gene3D - 88 219 - -
Apr2g0562 219 Pfam Glutathione S-transferase, C-terminal domain 121 188 - -
Apr2g0562 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0562 Apr-Chr2 6638770 6640444 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0562 1 219 Glutathione S-transferase Gene Family AT1G17180 69.863 2.43e-120 339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0562 2 6638770 6640444 Apr2g0562 2 6638770 6640444 ECH