Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0449 ATGCCTTCTTCTTCTCCAAAGTCCTTCCTCAGGCGCCCTCCACCATTGTTCAAATCACGCAGATCCTCCTTCTTCATCCTCTTATGCCTCGTCCTCTTCCTCTTCGCTTTCTTCTTCGCTTTTCTCAGACCCGTTCCCACCTCTCACTGCCTCAACAGCAAACCCAGATCGGTTAGAGTGCTCTGGGACCATGCCTCCTCCACCCAAAGCACTTCCCAAGTTGAAATTAGGCATAAAGTTATGGCCTTTGTGGGCATTCAAACTGGGTTTGGATCTGCGGGTAGGCGCCAATCTTTGAGGAACACTTGGTTTCCTTCTGATCCACTTGGACTCCAACGCTTGGAAGAAGCCACCGGCTTGGCTTTTAGGTTTGTTATTGGTAGAACCGGTGATAGATCAAAGATGTCTGCACTTCAGAAGGAAATAGCACAATATGATGATTTCATTCAATTGGATATTGAAGAGGAGTACAGTAAGCTCCCGTACAAAACATTGGCTTTCTTCAAAGCTGCTTATGCACTCTTTGAAGCCGACTTTTATGTCAAAGCTGATGATGACATATATTTAAGGCCAGATCGTCTTTCATTACTACTGGCAAAAGAGCGATCTCATCCTCAGACTTACATAGGATGCATGAAAAAGGGACCTGTTTTCACTGATCCAAAACTCAAATGGTATGAGCCACTAGCTAATTTGCTTGGAAAGGAATATTTTCTTCATGCTTATGGTCCTATCTATGCTCTTTCTGCTGATGTTGTATCAAGCTTGGTAGCTCTTAGGAATAACAGTTTCCGGATGTTCAGCAATGAGGATGTAACCATTGGAGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAATCATGAACTTTGTGCTCCAGAGTGTACATCCACATCAATTGCTGTGTGGGATATTCCAAAATGTTCAGGTCTCTGTAATCCAGAAAAGAAAATGTTGGAACTCCATCAAATGGAAAGCTGTACTCAGAGTGCAACTGTGGAATCTGATGAATAG 1017 0.4346 MPSSSPKSFLRRPPPLFKSRRSSFFILLCLVLFLFAFFFAFLRPVPTSHCLNSKPRSVRVLWDHASSTQSTSQVEIRHKVMAFVGIQTGFGSAGRRQSLRNTWFPSDPLGLQRLEEATGLAFRFVIGRTGDRSKMSALQKEIAQYDDFIQLDIEEEYSKLPYKTLAFFKAAYALFEADFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLANLLGKEYFLHAYGPIYALSADVVSSLVALRNNSFRMFSNEDVTIGAWMLAMNVNHENNHELCAPECTSTSIAVWDIPKCSGLCNPEKKMLELHQMESCTQSATVESDE* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0449 338 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 4 330 IPR002659 GO:0006486|GO:0016020|GO:0016758
Apr2g0449 338 Gene3D - 73 325 - -
Apr2g0449 338 PANTHER HEXOSYLTRANSFERASE 4 330 - -
Apr2g0449 338 Pfam Galactosyltransferase 95 288 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0449 Apr-Chr2 5203796 5209028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0449 3 338 Glycosyltransferase AT3G14960 70.930 5.00e-178 495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0449 2 5203796 5209028 Apr2g0449 2 5203796 5209028 ECH
Apr2g0449 2 5203796 5209028 Apr5g0158 5 1370470 1373969 PCT