Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0439 ATGGGTCCAAAGAAATGGTTTAAGATAATAGTCAAACTGAAGAAATCCAAGGAAGATAAATCCAAACAAGAAAAGGTAAATTCAAATACATATTCCAACGGAAACCAAATCACTTATGAAGAGTCAAGTAGCATTCCCAATGAAGGTTTGATGATAGACCGGACAGTTCCCACGAGGTTGATGGACGATATTGCAGCTACTCGGATTCAAAATGCGTTTCGTTCATTTATGGCAAGAAGAACATTGCACCATCTAAGGGGAGCAGTGAAATTTGAAGCTTTAATTCAAGATCACTTGGCCAGAGAGCAAACAGCAACAGCACTTAGCTATATACATTCATGGAGCAGAATACAAGAACAAATTAGAGCTCGCAGAATCTGTATGATAACAGAAGCCAGGATTAAGCAAAAGAAATTGGAAAACCAGTTAAAACTTGAGGCTAAGATTCAGGAACTTGAGGTGGAGTGGTGCAGTGGTTCTGAAACTATGGAAGAGATACTTTCAAGGTTACATCAGAGAGAAGCAGCAGCAGTTAAACGAGAGCGAGCCATGGCATACGCCTTCTCTCATCAGTGGAGGCCAAACTGTAGCCAGTATTTCGGCCAGGCTTCTTATAGCCTTGGTAAAGAAAGTTGGGGTTGGAGCTGGATGGAGCGTTGGGTTGCAGCTCGTCCTTGGGAAGTCCGGGTTCGAGTTCAGTCCACTAAAACAAAGAAACTCAATACTCAGCCCCAAAAAACTAAATCAGACAAGATGAACCACAATGAAAGCAAAGTGGCCTCGGCTAAACCTGCCCTGTCAAACGGGACGGAAAATGGGAAAGGAAAGGAAAACAGCACTTCAGTGCTGACAAAGAACGAAGTATCCAAATAG 873 0.4261 MGPKKWFKIIVKLKKSKEDKSKQEKVNSNTYSNGNQITYEESSSIPNEGLMIDRTVPTRLMDDIAATRIQNAFRSFMARRTLHHLRGAVKFEALIQDHLAREQTATALSYIHSWSRIQEQIRARRICMITEARIKQKKLENQLKLEAKIQELEVEWCSGSETMEEILSRLHQREAAAVKRERAMAYAFSHQWRPNCSQYFGQASYSLGKESWGWSWMERWVAARPWEVRVRVQSTKTKKLNTQPQKTKSDKMNHNESKVASAKPALSNGTENGKGKENSTSVLTKNEVSK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0439 290 MobiDBLite consensus disorder prediction 234 290 - -
Apr2g0439 290 MobiDBLite consensus disorder prediction 260 290 - -
Apr2g0439 290 MobiDBLite consensus disorder prediction 17 37 - -
Apr2g0439 290 ProSiteProfiles IQ motif profile. 65 90 IPR000048 GO:0005515
Apr2g0439 290 PANTHER IQ-DOMAIN 10 1 279 - -
Apr2g0439 290 PANTHER IQ-DOMAIN 5-RELATED 1 279 - -
Apr2g0439 290 Coils Coil 135 155 - -
Apr2g0439 290 MobiDBLite consensus disorder prediction 243 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0439 Apr-Chr2 5101263 5105197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0439 1 275 IQD Protein Family AT3G15050 50.000 2.82e-87 259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0439 2 5101263 5105197 Apr5g0148 5 1292704 1295839 ECH
Apr2g0439 2 5101263 5105197 Apr2g0439 2 5101263 5105197 ECH