Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0940 ATGAAGAGACATTGGCACAACAGGAATCACCACGTCCCAGATTTGGATTCCCACGCGCGCTCCTTTTCTAACAGAAAATTCCCCTTCACGCGCTTCATGGCCTTCTTTCTCCTCTCTCTCTTCCTCTTCTCTCTCTTCTTCATCCTTCCGCACCCTCCATCGCTAACAACAACAACTTCGCTTCCACTCGAACGAACTCAACCAGGTTTGAATGGTGATGCCTCTGATTCTGTTGAGCTGCAAAAAGATAAACTACTTGGTGGCCTTCTAGCAGCTGGATTCGATGAACAATCTTGTCTCAGCAGGTATCATTCGGTCAGCAAAGGACTATCAGGAAACCCTTCTTCTTACCTTGTTTCTAAATTGAGAAAATATGAAGCTCTTCACAAAGAATGTGGACCCTATACTGAATCATATAATAAAACGGTGAAAGATCTCAGGTCTGGTCATTTAAGTGAGTCCTCAGCATGTAAATATGTAGTATGGATTTCATATAGTGGGTTAGGGAATAGGATATTGACCTTGGCTTCTGCATTTCTATATGCTCTCCTCACAAATCGAGTTCTATTGGTTGATCCTGGAGTTGATATGATGAATCTGTTTTGTGAACCATTTCCACATGTTTCCTGGTTTCTCCCTCAAGATTTCCCTCTTAATAGTCAATTTAACAATTTTGATCAGAAATCTGATCAATGCTATGGGAAAATGCTGAAAAATAAATCAACTACAAACTCCATGGTGCCGTCTTTTGTGTACCTTCATCTAGCCCATGACTATGATGATCAGGATAAGCTTTTCTTCTGTGATGAAGACCAAGTTTTTCTCCAGAAAGTGCCTTGGTTAGTGGTGAAAACCGATAATTACTTTATCCCATCTCTGTTCTTGATGCCATCTTTTGAGCAGGAACTAAATAATCTCTTTCCAAACAAGGAAACAGTTTTCCATTTCTTGGGTAGATATCTGTTCCACCCCACCAACAAAGTGTGGGGACTTGTTATCCGATACTATAAAGCTTATTTAGCTAATGTTGATGAAAGAATAGGCATCCAGATAAGAGTGTTTGACACTGGAACTGGTCCATTTCAACATGTGTTGGATCAGATCATCGCTTGTACTTTGAAAGAGAATCTTTTGCCTGATGTTGACAGGAAGGGGGATATTGTTAGTTCATCTGGAAAACCAAAGTCAAAAGCAGTGTTGATGACATCCTTAAGCTCTGGTTATTTTGAAAAAGTGAGAGACATGTATTGGGAATATCCTACTGTGACAGGAGAAGTGGTTGGCATTTACCAGCCAAGCCATGAAGAATATCAACAAACAGAGAAGCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTACCTTTTAAGCTTAAGTGATGTGTTGGTTACTAGCTCGTGGTCTACTTTCGGCTATGTGGCGCAGGGGCTTGGAGGTTTGAAACCTTGGATACTATACAAACCTGAGAATGGAACAGCTCCTAATCCTGCGTGTCAACGTGCCATGTCAATGGAGCCGTGCTTCCATGCTCCTCCCTTGTATGATTGTAAGGCCAAGAGAGGAGCTGACACTGGTGCACTTGTTCCACATGTGAGGCACTGTGAGGATATGAGTTGGGGTCTTAAGCTTGTAGAAAATCGTAGTTAG 1647 0.4177 MKRHWHNRNHHVPDLDSHARSFSNRKFPFTRFMAFFLLSLFLFSLFFILPHPPSLTTTTSLPLERTQPGLNGDASDSVELQKDKLLGGLLAAGFDEQSCLSRYHSVSKGLSGNPSSYLVSKLRKYEALHKECGPYTESYNKTVKDLRSGHLSESSACKYVVWISYSGLGNRILTLASAFLYALLTNRVLLVDPGVDMMNLFCEPFPHVSWFLPQDFPLNSQFNNFDQKSDQCYGKMLKNKSTTNSMVPSFVYLHLAHDYDDQDKLFFCDEDQVFLQKVPWLVVKTDNYFIPSLFLMPSFEQELNNLFPNKETVFHFLGRYLFHPTNKVWGLVIRYYKAYLANVDERIGIQIRVFDTGTGPFQHVLDQIIACTLKENLLPDVDRKGDIVSSSGKPKSKAVLMTSLSSGYFEKVRDMYWEYPTVTGEVVGIYQPSHEEYQQTEKQMHNQKAWAEMYLLSLSDVLVTSSWSTFGYVAQGLGGLKPWILYKPENGTAPNPACQRAMSMEPCFHAPPLYDCKAKRGADTGALVPHVRHCEDMSWGLKLVENRS* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0940 548 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1 548 IPR004938 GO:0008107|GO:0016020|GO:0042546
Apr1g0940 548 Pfam Xyloglucan fucosyltransferase 79 517 IPR004938 GO:0008107|GO:0016020|GO:0042546
Apr1g0940 548 Gene3D - 154 213 - -
Apr1g0940 548 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 1 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0940 Apr-Chr1 13445031 13447825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0940 80 544 Xyloglucan Fucosyltransferase1 AT2G03220 67.880 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0940 K13681 - gmx:100800258 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0940 1 13445031 13447825 Apr1g0940 1 13445031 13447825 ECH