Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0650 ATGGCCTTGCCAACACCACAAACACAAAGATTCCTCTTGAACAAGCTCCATGGCCGCTCCACCTCTAAGAACACACACAGAAACAGCTTTGCCAATACGAGCAGAAGCAGGTGCTGCTCTGCCATAGCCATTGATGCTCCATCTTCTTTCACTGAGGTGCCCGGTATAAGATGGGGATCCATTGCTTTGCAGGGTCTCCGTGAAGAGATGGAAGATGATGTTATTGTTCGAAATGATGCGCTTCATGGCTTCTCTTTTGCTGCTGTCTTTGATGGCCATGGAGGCTATTCTTCGGTCCAGTTCCTCAGGGATGAGCTGTACAAGGAGTGTCTTGAAGCTTTACAAGGAGGGTTACTGTTAGTTGAGAAAGATTTCAGAGCCATTGAAGGAGCATTACAGGAGGCATTTGTCAAAGCTGACATGAGGTTGCTAAAGTGGCTTGAAATGAAAGGAGAGGAAGAACAATCAGGTGCTACAGCAACTGCAATATTCATAGGAGATGATAAGATGCTAATTTCACATATTGGTGACTCATCTGTTGTTCTAAGCAGATCTGGAAAAGCAGAGGTGCTGACTAGTCCTCACCGACCATATGGGAGCAACAAGACTTCTCTAGAAGAAATTAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAATGGTAGAATCTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACATACGATTCAAAACAAAGAAGAATGAGATGCTGCAAAAAGGAGTTCAGGAAGGAAGATGGTCAGCAAAGTTTATTTCTCGTGTACAGCTCAACAATGACTTGGTTGTTGCATACCCTGATATTTCTCAAGTAGCTCTTGGCTCAGATGCAGAATTTATAGTATTAGCATCTGATGGCTTATGGGATTACATGAGCAGCTCAGAAGCAGTTTCTTTAGTGAGGGATCAACTACGAAAACACGGAAACATTCAGTTAGCTTGTGAAGCGCTTGCGCAAGCTGCTTTGGACCGACGTACGCACGATAATGTTAGCATTGCAATTGCTGATTTAGGGCGTACAGACTGGCAGAATTTACCACAGCAGCGACAAAATGTTATATTGGAGATGGTCCAAGCTCTTGCCACCATTGGAATTGTGTCTATTGGAATCTGCTTTGAACAGTGGTCCACAATGACCAAGATTTAA 1170 0.4402 MALPTPQTQRFLLNKLHGRSTSKNTHRNSFANTSRSRCCSAIAIDAPSSFTEVPGIRWGSIALQGLREEMEDDVIVRNDALHGFSFAAVFDGHGGYSSVQFLRDELYKECLEALQGGLLLVEKDFRAIEGALQEAFVKADMRLLKWLEMKGEEEQSGATATAIFIGDDKMLISHIGDSSVVLSRSGKAEVLTSPHRPYGSNKTSLEEIKRIREAGGWIVNGRICGDIAVSRAFGDIRFKTKKNEMLQKGVQEGRWSAKFISRVQLNNDLVVAYPDISQVALGSDAEFIVLASDGLWDYMSSSEAVSLVRDQLRKHGNIQLACEALAQAALDRRTHDNVSIAIADLGRTDWQNLPQQRQNVILEMVQALATIGIVSIGICFEQWSTMTKI* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0650 389 CDD PP2Cc 56 345 IPR001932 -
Apr1g0650 389 ProSiteProfiles PPM-type phosphatase domain profile. 57 345 IPR001932 -
Apr1g0650 389 Pfam Protein phosphatase 2C 59 338 IPR001932 -
Apr1g0650 389 PANTHER PROTEIN PHOSPHATASE 2C 7 380 IPR015655 GO:0004722|GO:0006470
Apr1g0650 389 ProSitePatterns PPM-type phosphatase domain signature. 86 94 IPR000222 GO:0043169
Apr1g0650 389 SMART PP2C_4 47 343 IPR001932 -
Apr1g0650 389 SUPERFAMILY PP2C-like 48 346 IPR036457 -
Apr1g0650 389 PANTHER PROTEIN PHOSPHATASE 2C 57 7 380 - -
Apr1g0650 389 Gene3D - 56 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0650 Apr-Chr1 7803280 7808076 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0650 1 7803280 7808076 Apr1g0650 1 7803280 7808076 ECH
Apr1g0650 1 7803280 7808076 Apr9g0466 9 6492146 6493525 PCT