Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0439 ATGGGAAATGCAAACAACGACACGGATGAGTACATAGTTTGCTATGCACCTACCATGATAACAACAAATGGGATATGGCAAGGAGATAACCCTTTGGATTATTCTCTCCCACTTTTCATATTGCAATTAACATTAGTTGTGGCAGCCACCCGAATATTTGTCTTCATTCTCAAGCCCTTTCGCCAGCCACGTGTAATTGCTGAAATATTGGGTGGAGTAATGTTGGGTCCTTCAGTGCTTGGGCAAAACAAAGCATTTGCTGATGCAATATTTCCTCTAAGAAGTGTGATGGTGATTGAAACAATGGCCAATGTTGGTCTCCTTTATTTTCTCTTCTTGGTGGGAGTGGAAATGGACATAACGGTGTTAAGAAGAGTAGGTAAAAAAGCAGTGGTTTCGGCAATTGCTGGCATGGTTTTGCCTTTCCTTATTGGATGTACTTTCGTTTTCTTTTCGACCAAAGAAACTATTGAGATTAACAGAGGAACTTTTGTACTATTCATTGGCGTTGCACTCTCTGTCACTGCATTTCCTGTTCTTGCTAGGGTCCTTGCTGAGCTTAAACTGATCAACACTGAGTTGGGTAGGCTTGCTCTTTCAGCTGCCCTCATCAATGATGTGTGTGCTTGGGTTCTCTTAGCATTAGCCGTTGCTTTATCTGAGAATAAATCAACTACCTTTGCTTCTCTATGGGTTCTATTGTCAAGTGCAGCATTTGTGGCCTTCTGTGCTTATGTTGTTAGACCAGCAGCTTCATGGGTAGTTAATAGAACCCCTGAAGGAGAATCCTTCAGTGAGTTCTATATATCTCTTATACTAGCTTCTGTCATGGTCTCAGGTTTCATCACTGATGCTATTGGAACTCATTCTGTTTTTGGAGCTTTTGTGTTTGGTTTGGCAATCCCAAATGGACCACTAAGCTTTACACTTGTGGAAAAGCTTGAAGACTTCGTTTCTGGACTTTTACTGCCTCTCTTTTTTGCCATTAGTGGGCTAAAAACTAATGTACGACTCATCCAAGGGACATACACTTGGGCACTTCTTTTTCTTCTCATTTTCCTGGCTTGCATTGGCAAAGTTATCGGAACTTTATTGGTTGCTTTCTTTTATCAAATGCCAATACATGAAGGAGCTGCCCTTGGCTTACTTATGAACACAAAAGGCCTCGTTGAAATGGTCGTGCTTAATGTTGGGATGGACCAGAAGGCTTTTGATGAAAAATTATTTGCAGTCATGGTTGTTATAACTCTAGTAATGACTTCAATCGTTGTGCCTGCCATATCAATTATTTATAGGCCATCAAGGAATAACATATGTTACAAAAGAAGAACAATTGAGATGTCAAAATCGGAAGTTGAGTTCAGAGTCCTAGTATGTGTCCACACCCCTAGAAACGTCCCAACTATGATCAATCTCCTTGAAGCATCTAATCCAACTAAGAAGTCCCCAATATGTGTCTATGTGCTCCATTTGGTGGAACTTAGTGGCCGTACATCTGCCATGCTCATTGTCCACAACGCTTCAAAACCTGAACACCCACCACTTAATAGAACTGAAGCACAATCTGATCACATAATGAAAGCCTTTGAAAACTATGAGCAACATGCTTCAGATATCTCGGTGCAACCCTTAACAGCTATCTCCCCTTATTCCACCATGCATGAAGACATATGCAATTTGGCAGAAGAGAAACGCGTGTCTCTAATAATTGTACCTTTTCATAAACAACAAACAGTTGATGGTGGAATGGAAGCTACCAACATGGCATTTAGAACCATTAACCAAAATGTACTAGCACATGCACCTTGTTCTGTGGGAATTCTAGTGGATAGAGGCTTTAGTGGCTCTAACCGTTTGGATGCAAATCAAGCGTGTCATCATATAGCAATATTATTTTTTGGAGGACCAGATGATAGAGAAGCATTATGCTATGGATGGAGAATGCTGGAACATTCAGGCATTAGCCTTACTATAATGCGTTTTGTTCCAGGTGATCAATTATCTGAGCCATTGAAGCAACATGTTGACTTCGTTTCCGATGAACCAAGAGTGTTGACAGTGCAAACAGATAAAGATATAGATAAACAACTTGATGAAAAGCTTATATGTGAGTTTAGAATGATATGTTGTGATTATGATTCTGTTGATTACATTGAAAAAGTGGTTAATAACGGTGAAGATACAGTGGCAGCAATAAGGACAATGGATGATATTCATGACCTTTTCATTGTTGGGAGAGGTCAAGGTATGATATCACCACTCACTGCAGGACTCACTGATTGGAGTGAGTGCCCAGAAATTGGAGCAATTGGGGATCTATTAGCATCTTCAGATTTTGCAGCAACTGCTTCAGTTTTGGTGGTGCAACAATATGTGGGGTCACAATGTGAAGAGATAGTAACACCAAATGGTGAAGAACATATCACTGAGATTACTCGTCGTCCTCTAACACCACAAGGACATAAGGTGACCATTTCAGACCACTAG 2487 0.4053 MGNANNDTDEYIVCYAPTMITTNGIWQGDNPLDYSLPLFILQLTLVVAATRIFVFILKPFRQPRVIAEILGGVMLGPSVLGQNKAFADAIFPLRSVMVIETMANVGLLYFLFLVGVEMDITVLRRVGKKAVVSAIAGMVLPFLIGCTFVFFSTKETIEINRGTFVLFIGVALSVTAFPVLARVLAELKLINTELGRLALSAALINDVCAWVLLALAVALSENKSTTFASLWVLLSSAAFVAFCAYVVRPAASWVVNRTPEGESFSEFYISLILASVMVSGFITDAIGTHSVFGAFVFGLAIPNGPLSFTLVEKLEDFVSGLLLPLFFAISGLKTNVRLIQGTYTWALLFLLIFLACIGKVIGTLLVAFFYQMPIHEGAALGLLMNTKGLVEMVVLNVGMDQKAFDEKLFAVMVVITLVMTSIVVPAISIIYRPSRNNICYKRRTIEMSKSEVEFRVLVCVHTPRNVPTMINLLEASNPTKKSPICVYVLHLVELSGRTSAMLIVHNASKPEHPPLNRTEAQSDHIMKAFENYEQHASDISVQPLTAISPYSTMHEDICNLAEEKRVSLIIVPFHKQQTVDGGMEATNMAFRTINQNVLAHAPCSVGILVDRGFSGSNRLDANQACHHIAILFFGGPDDREALCYGWRMLEHSGISLTIMRFVPGDQLSEPLKQHVDFVSDEPRVLTVQTDKDIDKQLDEKLICEFRMICCDYDSVDYIEKVVNNGEDTVAAIRTMDDIHDLFIVGRGQGMISPLTAGLTDWSECPEIGAIGDLLASSDFAATASVLVVQQYVGSQCEEIVTPNGEEHITEITRRPLTPQGHKVTISDH* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0439 828 Pfam Sodium/hydrogen exchanger family 46 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr1g0439 828 PANTHER CATION/H + ANTIPORTER 8 801 - -
Apr1g0439 828 Gene3D - 478 759 - -
Apr1g0439 828 PANTHER CATION/H+ EXCHANGER 3 8 801 - -
Apr1g0439 828 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 486 605 - -
Apr1g0439 828 Gene3D - 38 437 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0439 Apr-Chr1 5413463 5416527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0439 8 798 Antiporter Super Family AT2G13620 68.521 0.0 1109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0439 - - gmx:100818927 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0439 1 5413463 5416527 Apr1g0439 1 5413463 5416527 ECH