Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0067 ATGGCTTTGGGAGAAAAATCTCAAAAAGTCACAGATAATGCAAAAGGGAATAAGAATCTTACAGAATCAACTGAAGGTTCAAAAAAAAATTCTTCTGAAACACTTGATGGACTAACAGTCCTTTCACGATTTGATCAAGGATCATGCTTAAGCAGATTTGAATCTTACTTATATCACAAAGCATCCCCTCATAAACCCTCTCCATATCTCATAGCCAAACTACGCAACTACGAAAATCTTCACAAGAGTTGTGGACCAAACACTAGACCTTACAACAGGACCATGGTGATGCTCCGAGAACATTGGACCAATTTTACCTATGAATGTAACTACGTTGTGTGGACAGCTTCAGATGGCTTAGGGAACAGAATGGTGAGCATGATTTCAGCATTCCTCTATGCAATCCTAACAGATCGAGTCCTACTTGTGGAATTTAAGGATGATATGGTTGATCTATTTTGTGAACCATTTCCCAATTCATCATGGTTATTACCCAAGAACTTTCCCTTTAGTAACGACAAAGGACATGTTGGAACATATGAAAGCATGTCAGAAAAACACAAGGAAAACAATTCAAAGGAGATTTTACCATCAGCTCTGAATTTGAAGATAAGACATACCCATGAAGATCATGAAAGGTTTCTCCGATGTGATGATACCCAACATCTTCTTCAAGAAGTTCCTCTCTTGTTTTTGTGTGCAAATCAATATTTTGTACCTTCTCTTTTCATGGTTCCATCCTTCAGCCAAGAGCTAAGCAAAATGTTCCCTAAGAAAGACACTGTCTTTCACCATTTGGGACGCTACCTCTTTCTCCCTTCAAATGAGGCATGGGGACCTATTCGCAGATTCTATCAAGCATATTTAGCCAGAGCAGATGAGAGAATTGGCATCCAAATAAGAGTATTCAGTCCCCATAAAACCCCATATCAAACAATTATGAATCAGATTTTAAATTGCACCCTGAAGAATAATATACTACCCAACATTAGCACCGAAGATTCAAAATATTTTGCAGTGCAAAATCAGACTTTGAAGTCTGTTCTTGTAGCATCTCTTTATCCAAAGTATGGTGAGAACCTTAGGACTATGTATTTGACAAGACCAACTGTTTCTGGGGATGTGATAAGTGTTTATCAGCCAAGTCATGAAGAGCATCAAAAGTTCAATGATAACAAGCATAACATGAAGGCGTGGACAGAAATATATCTATTAAGTTTATGTGATGTTTTGGTGACCAGCTCTTTTTCAACTTTTGGGTATGTGGCTCAAAGTTTGGGAGGCCTGAAACCTTGGGTTCTGCACAACTCACAAAACCAAAAAATCCAGAATCCTCAATGTGTGAGAGACTTCTCTGTGGACCCTTGTTTTCATTTTCCTCCTAAACTTGATTGCATGGGAAAGCCCATAGATGATATTGGTAAAGCTTTTCCATATATAAGGAGATGTCTAGATTATGAATGGGGTGTTAAGTTGGTCAACGATTATTAG 1491 0.3816 MALGEKSQKVTDNAKGNKNLTESTEGSKKNSSETLDGLTVLSRFDQGSCLSRFESYLYHKASPHKPSPYLIAKLRNYENLHKSCGPNTRPYNRTMVMLREHWTNFTYECNYVVWTASDGLGNRMVSMISAFLYAILTDRVLLVEFKDDMVDLFCEPFPNSSWLLPKNFPFSNDKGHVGTYESMSEKHKENNSKEILPSALNLKIRHTHEDHERFLRCDDTQHLLQEVPLLFLCANQYFVPSLFMVPSFSQELSKMFPKKDTVFHHLGRYLFLPSNEAWGPIRRFYQAYLARADERIGIQIRVFSPHKTPYQTIMNQILNCTLKNNILPNISTEDSKYFAVQNQTLKSVLVASLYPKYGENLRTMYLTRPTVSGDVISVYQPSHEEHQKFNDNKHNMKAWTEIYLLSLCDVLVTSSFSTFGYVAQSLGGLKPWVLHNSQNQKIQNPQCVRDFSVDPCFHFPPKLDCMGKPIDDIGKAFPYIRRCLDYEWGVKLVNDY* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0067 496 PANTHER FUCOSYLTRANSFERASE 2-RELATED 12 495 IPR004938 GO:0008107|GO:0016020|GO:0042546
Apr1g0067 496 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 12 495 - -
Apr1g0067 496 MobiDBLite consensus disorder prediction 13 32 - -
Apr1g0067 496 MobiDBLite consensus disorder prediction 1 32 - -
Apr1g0067 496 Gene3D - 280 447 - -
Apr1g0067 496 Gene3D - 107 225 - -
Apr1g0067 496 Pfam Xyloglucan fucosyltransferase 27 465 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0067 Apr-Chr1 768564 770151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0067 19 496 Xyloglucan Fucosyltransferase1 AT2G03210 47.870 1.93e-161 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0067 K13681 - gmx:100799776 565.459