Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1177 ATGGTACTTATCCAAGAAGAAATAGATCTGCCTTATGTTCAATTATCTGATACAGAAGAAGACGAGAAAACTGATGCTACCGCGACAACAGCAGAAGATGAAATTATAGACTATGAAGATCTGAAGAAGCGCATATGGAAAGACCGTGTCCTTCTCCAGAAGATGAAGGAAAAACTTAACATGGACGAATCTGACAACAAAAAAGCTAAGCAAGAAGCGTCCAGGAAAAAAAAGATGTCTAGAGCACAAGACTCCGTCCTCAAATACATGGTGAAAATCATGGAGGTTTGCAAAGCTCGTGGATTCGTTTATGGCATCGTCCCTGAAAATGAATTAGATGAGTCGTCAAGCATACACCTTCTCCAAGATCTTCAAGATGCAACACTAGGATCTCTTCTTTCAGCACTGATGCAACACTGTGTGCCGCCACAGAGGAAGTATCCTTTGGAGAAAGGCGTGGCTCCGCCGTGGTGGCCTAATGGGTCAGAGGCATGGTGGGGCAAACAGGGCTCTTTGGCTCAAGAACACGGGCCACCACCGTATAAGAAACCCCATGATTTGAAGAAGGCATGGAAGGTTTCGGTATTGGCTTCGGTTATAAAGCACATGTCCCCTGACTTAGAGAAATTGAGAAGGCTCGTGACTCAATCAAGGACCTTGCAAGATAAGATGACTGCCAAAGATAACGTTACTTGGTCTAAAGTTGTGAGCCAAGAAGAAGCTTTGTTGAGACTTACCAACAAGTGTCTTAAGATTTCCCCTTCTTCGTCCAGCGACGAGGAGAATAATAAGGAAGACAGGGAGGGGGAAATTAAAGTCTTTGAGTCATCCCCAATAAGCTCTATTAATAATCCTCTTGATCATGTTTTGTTTGGTGGTGGCAGCAGTGGCAACAACGGAGGCAGTGAAAAAAGAAAGTGTGATTTTGATAGTAGTAATGATGGGAACAACAACAATAATAGTAATAGCTTTGTGGATAAACCAATATATACATGTCAGAACGTAGATTGTCCACAAAGCGATTTGTCTATGGGATTTAGAGACAAGAATTCAAGGATGGACCACGAGTCGATGTGTGCTTTTCGCAGTGCCACTCTCGATCATCAGGGGATTAATAGCAGCAATGAGAATTCCAAGGCTTTCCATGATTACCTGTCGAGTGAGGAGAGGATGACAAGTGTTGGAGATTGGATGAATATGGAGGTAGCTAAGGCCAATAACAACAATAATAATTTGGGTGACACTGATTTTGGTGATATTGATATTATGAATGGAACGGAAGAGATTGCAGGTGAAGCTTTTGGTGAGGACAATTTAGGGTTGTGGCTGAATGACATTGAAGATTGTGAGTTGTTTGCGGCATTGGAGATGGTTAAAGCAAATAGCGTGATGGATTCAACTCATCAGAATAATAATCCACCATTAATAAAGCATGATCATTTTTTCCCACATGACGGCCATCTTGACGATGAAGCAACTACTTCATCACTTTGGGACTATGCTAGTACTTCGTTTAAGAGCAACAACATTTGA 1533 0.4207 MVLIQEEIDLPYVQLSDTEEDEKTDATATTAEDEIIDYEDLKKRIWKDRVLLQKMKEKLNMDESDNKKAKQEASRKKKMSRAQDSVLKYMVKIMEVCKARGFVYGIVPENELDESSSIHLLQDLQDATLGSLLSALMQHCVPPQRKYPLEKGVAPPWWPNGSEAWWGKQGSLAQEHGPPPYKKPHDLKKAWKVSVLASVIKHMSPDLEKLRRLVTQSRTLQDKMTAKDNVTWSKVVSQEEALLRLTNKCLKISPSSSSDEENNKEDREGEIKVFESSPISSINNPLDHVLFGGGSSGNNGGSEKRKCDFDSSNDGNNNNNSNSFVDKPIYTCQNVDCPQSDLSMGFRDKNSRMDHESMCAFRSATLDHQGINSSNENSKAFHDYLSSEERMTSVGDWMNMEVAKANNNNNNLGDTDFGDIDIMNGTEEIAGEAFGEDNLGLWLNDIEDCELFAALEMVKANSVMDSTHQNNNPPLIKHDHFFPHDGHLDDEATTSSLWDYASTSFKSNNI* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1177 510 Gene3D - 110 249 IPR023278 GO:0003700|GO:0005634
Amo20g1177 510 PANTHER ETHYLENE INSENSITIVE PROTEIN 111 469 - -
Amo20g1177 510 Coils Coil 52 72 - -
Amo20g1177 510 MobiDBLite consensus disorder prediction 253 325 - -
Amo20g1177 510 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 26 110 IPR006957 GO:0005634
Amo20g1177 510 Pfam Ethylene insensitive 3 39 111 IPR006957 GO:0005634
Amo20g1177 510 Pfam Ethylene insensitive 3 115 240 IPR006957 GO:0005634
Amo20g1177 510 MobiDBLite consensus disorder prediction 258 273 - -
Amo20g1177 510 SUPERFAMILY DNA-binding domain of EIN3-like 118 243 IPR023278 GO:0003700|GO:0005634
Amo20g1177 510 PANTHER ETHYLENE INSENSITIVE PROTEIN 26 110 - -
Amo20g1177 510 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 111 469 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1177 Amo-Chr20 23053790 23055778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1177 34 454 EIL Transcription Factor Family AT5G65100 38.603 1.41e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Amo20g1177 EIN3 6.1e-64 No_clan