Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4569 ATGTCCCCTTTCCTTCTGCTTTTCTTTCTTCTTTGCTGCAACTCTCTTGCACCTCTTGTTAATTCCCTCAATGCCGAAGGCTATGTGCTCTTGACGCTTAAGCAGTCCCTTCAAGACCCACAAGGCTCCATGGTCACTTGGAATTCTTCCCATGACAACCCTTGTTCATGGAATGGGATTACCTGCAAGGACCAAACTGTTGTCTCCATTAGCATCCCAAAAAGGAAACTTTATGGTTCTCTCCCTTCAGCTGTGGGATCTCTCTCCCAGCTCCGCCATCTCAACTTCAGGAACAACAAGCTCTTTGGAACCTTGCCTCCTCAGCTTTTTCAAGCTCGGGGGCTGCAAAGTTTGGTGCTTTATGGCAATTCCTTCTCTGGGTCTGTTCCCAGTGAGATTCAGAATCTCAGGTACCTTCAAACTCTTGACCTGTCACAAAATTCCTTCAATGGCTCATTGCCTGCTACAATTGTCCAATGCAAGAGGCTCAGAACCCTTGTTCTCAGTAGAAACAATTTCACTGGCACTTTGCCTGCTGGATTTGGTACTAGTTTCTCTTCTCTTGAGAAACTTGACCTCTCTTTCAATCAATTCAATGGTTCAATTCCTGCAGACATGGGTAATCTAACTAGCCTTGAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTCAATACCAGCTAGCCTTGGTAACTTGCCTGAGAAGGTTTACATTGATCTTACTTACAACAATTTGAATGGTCCAATACCACAAAATGGTGCTTTAATGAATAGAGGACCAACTGCTTTTATTGGCAATCCTGGTCTGTGTGGCCCTCCTTTGAAGAATTCATGTGCCCCTGACACTCCAGGTGCTAGTTCACCTTCCTCATTCCCGTTCATGCCTCATAATGACTCATCTCAGGATAGTGGTAATGGTTCTGGGAAGAGTGAGAAAAACAAAGGGTTAACTAAGGGTGCTGTGGTTGGCATTGTTGTGGGTGATGTGATTGGAATTTGCCTTTTAGGTCTTCTGTTCTCTTATTGCTATTCAAGGGTTTGTGGTTTTGATCAGGACCAGGATGTTATTAGTGTTAGCAAGGGGAGGAAAGGAAGTAGTAAAGAGTGTTTCTGCTTCCGAAAGGACGAATCCGAGGCCCTGTCTGATCATGTTGAGCAGTATGATCTTGTTCCATTAGATAGCCAAGTGGCCTTTGATTTGGATGAACTTCTTAAGGCATCGGCTTTTGTTCTTGGGAAGAGTGGAATTGGAATTATGTACAAAGTGGTGCTTGAAGACGGGCTTGCATTGGCGGTGAGAAGATTGGGGGAGGGAGGTTCTCAAAGGTTCAAAGAGTTCCAAACCGAAGTAGAGGCAATAGGAAAGTTGAGACATCCAAACATTGTGACTCTCAGAGCTTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATATACCAAATGGAAGCCTCGCTGCTGCAATTCATGGGAAGCCTGGACTAGTTACATTCAGACCGCTATCTTGGTCTTATCGATTGAAAATCATGAAAGGAACTGCAAAAGGATTGGTCTACCTGCATGAGTTTAGCCCCAAAAAGTATGTTCATGGAGACCTGAAGCCAAGTAACATCCTTCTTGGACATAACATGGAACCARACATATCTGATTTTGGACTCGGGCGCCTTGCAAATATTGCCGGAGGTTCCCCAACCYTGCAATCCAGCCGAGTGGCRGCTGAGAAGCCGCAAGAGAGACAAAGGAGCTTGTCCATAGAACTTACACCTAATATCTTGGGGAATGGTTATCAGGCTCCAGAAACACTAAAAGTGGTGAAGCCATCACAGAAGTGGGATGTTTATTCATACGGTGTGATCTTGTTGGAGATTATCAGCGGAAGGTTACCYATTGTGCAAGTTGGTAACTCGGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATTGAGGAGAAGAAACCACTCTCAGATGTGTTGGACCCATATTTAGCTGAGGAGGCAGATAAGGAAGAGGAGATAATTGCAGTGTTGAAGATTGCAATGGCTTGTGTCCAAAGCAGCCCTGAAAAGAGACCTACAATGAGGCATGTGCTTGATGCTTTAGATAGATTATCTGTATCCTCTGATTGA 2136 0.441 MSPFLLLFFLLCCNSLAPLVNSLNAEGYVLLTLKQSLQDPQGSMVTWNSSHDNPCSWNGITCKDQTVVSISIPKRKLYGSLPSAVGSLSQLRHLNFRNNKLFGTLPPQLFQARGLQSLVLYGNSFSGSVPSEIQNLRYLQTLDLSQNSFNGSLPATIVQCKRLRTLVLSRNNFTGTLPAGFGTSFSSLEKLDLSFNQFNGSIPADMGNLTSLEGTVDLSHNHFSGSIPASLGNLPEKVYIDLTYNNLNGPIPQNGALMNRGPTAFIGNPGLCGPPLKNSCAPDTPGASSPSSFPFMPHNDSSQDSGNGSGKSEKNKGLTKGAVVGIVVGDVIGICLLGLLFSYCYSRVCGFDQDQDVISVSKGRKGSSKECFCFRKDESEALSDHVEQYDLVPLDSQVAFDLDELLKASAFVLGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYIPNGSLAAAIHGKPGLVTFRPLSWSYRLKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPXISDFGLGRLANIAGGSPTLQSSRVAAEKPQERQRSLSIELTPNILGNGYQAPETLKVVKPSQKWDVYSYGVILLEIISGRLPIVQVGNSEMDLVQWIQFCIEEKKPLSDVLDPYLAEEADKEEEIIAVLKIAMACVQSSPEKRPTMRHVLDALDRLSVSSD* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4569 711 SMART serkin_6 412 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4569 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Amo19g4569 711 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
Amo19g4569 711 ProSiteProfiles Protein kinase domain profile. 407 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4569 711 Pfam Leucine rich repeat 113 173 IPR001611 GO:0005515
Amo19g4569 711 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 710 - -
Amo19g4569 711 SUPERFAMILY Protein kinase-like (PK-like) 412 703 IPR011009 -
Amo19g4569 711 Pfam Protein kinase domain 413 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4569 711 Gene3D Transferase(Phosphotransferase) domain 1 483 711 - -
Amo19g4569 711 Pfam Leucine Rich Repeat 90 109 IPR001611 GO:0005515
Amo19g4569 711 MobiDBLite consensus disorder prediction 282 314 - -
Amo19g4569 711 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Amo19g4569 711 SUPERFAMILY L domain-like 25 276 - -
Amo19g4569 711 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 5 710 - -
Amo19g4569 711 Gene3D Ribonuclease Inhibitor 78 284 IPR032675 -
Amo19g4569 711 Gene3D Ribonuclease Inhibitor 17 77 IPR032675 -
Amo19g4569 711 CDD STKc_IRAK 413 706 - -
Amo19g4569 711 MobiDBLite consensus disorder prediction 277 314 - -
Amo19g4569 711 SMART LRR_typ_2 136 160 IPR003591 -
Amo19g4569 711 SMART LRR_typ_2 88 112 IPR003591 -
Amo19g4569 711 SMART LRR_typ_2 185 209 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4569 Amo-Chr19 163260349 163263298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4569 5 711 Receptor kinase-like Gene Family AT2G01210 67.503 0.0 985
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo19g4569 Pkinase 2.3e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4569 19 163260349 163263298 Amo19g4569 19 163260349 163263298 ECH