Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4567 ATGATTTGTAACAGTGTGTTTGTTTTGTTCTCCTTTCTGATTTTGCTTTTGGTAAATTTCCTTAAATTTTATGGTACCTTAATTCCTTCTTCCTATTTTCTCATTGGAAGCAGAGAAATGCCAGAAATTCAATTGGGTACACACACTATCAGATCACATGGAACTAGTGTGGCAAGAATACATATGCATGACTGGTTTATTCTTTTGCTTCTTGTGATCATTGATGCTGTCTTGAATATAATAGAGCCATTCCATCGTTTTGTTGGACGGGATATGATGACAGACCTTAGCTACCCATTGAAAGATAATACTATTCCCTTTTGGGCAGTTCCGATCATTGCAATATTGTTGCCGCTGGTCATCTTTCTTATTTACTATTTCATTAGAAAGGATGTTTATGACTTTCACCATGCTATATTGGGCCTTCTATATTCAGTCCTCATTACTGCTGTGATAACTGATGCTATCAAAGATGGTGTTGGACGACCACGGCCAGATTTCTTCTGGCGTTGTTTTCCTAATGGAAAAGGGGTGTATGATCAAGTAACAACCGATGTTATGTGTACTGGAGATAAAAGTGTTATCAAGGAAGGGCACAAAAGCTTCCCAAGTGGACATACCTCCTGGTCCTTTGCTGGTCTTGTTTATCTGTCTTGGTATCTATCTGGAAAAGTTAGGGCGTTTGATCGTAGCGGTCACATTGCAAAGCTCTGTCTTGTTTTCTTTCCAATCCTCATGGCATCTATGGTTGCTGTCTCTCGTGTTGATGATTATTGGCATCATTGGCAAGATGTGTTTGCTGGAGGCCTAATAGGGAGTGTAATTGCTTCCTTTTGTTACTTGCAATTCTTCCCACCACCATATGACACTGATGGGTGGGGGCCTCATGCATATTTCCGGATGTTGGCTGAATCTCATAATGCCGCTCGACCCTCTTCCGCCAATAATGACAGCCAGCGAGTGCAGTCCTCTGAGCTTCAGGCAGTAACTTTGTATATCCCACCTCACCAGGAGGGAGATACACGAAGCAATAGCTGGGATTCAAGCCCCATGTTAGGCGCACCACAAAATGTCAGGACACACTGA 1086 0.4208 MICNSVFVLFSFLILLLVNFLKFYGTLIPSSYFLIGSREMPEIQLGTHTIRSHGTSVARIHMHDWFILLLLVIIDAVLNIIEPFHRFVGRDMMTDLSYPLKDNTIPFWAVPIIAILLPLVIFLIYYFIRKDVYDFHHAILGLLYSVLITAVITDAIKDGVGRPRPDFFWRCFPNGKGVYDQVTTDVMCTGDKSVIKEGHKSFPSGHTSWSFAGLVYLSWYLSGKVRAFDRSGHIAKLCLVFFPILMASMVAVSRVDDYWHHWQDVFAGGLIGSVIASFCYLQFFPPPYDTDGWGPHAYFRMLAESHNAARPSSANNDSQRVQSSELQAVTLYIPPHQEGDTRSNSWDSSPMLGAPQNVRTH* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4567 361 PANTHER LIPID PHOSPHATE PHOSPHATASE 2 40 338 - -
Amo19g4567 361 CDD PAP2_containing_1_like 94 283 - -
Amo19g4567 361 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 58 291 - -
Amo19g4567 361 PANTHER LIPID PHOSPHATE PHOSPHATASE 40 338 IPR043216 GO:0006644
Amo19g4567 361 MobiDBLite consensus disorder prediction 337 361 - -
Amo19g4567 361 Pfam PAP2 superfamily 139 284 IPR000326 -
Amo19g4567 361 SMART acid_phosph_2 140 280 IPR000326 -
Amo19g4567 361 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 60 288 IPR036938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4567 Amo-Chr19 163198421 163201197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4567 40 329 Lipid Metabolism Gene Families AT1G15080 71.034 1.18e-154 434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4567 19 163198421 163201197 Amo19g4567 19 163198421 163201197 ECH