Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4564 ATGTTCATGTTTGAAAACCAAAAGGGAATGGAGAAGGTCTGTGAATTCTGCACGGATTTGAGGCCACTTGTATATTGTAAGGCTGATGCAGCTTATCTGTGTCTATCCTGTGATTCAAAGGTGCATTTTGCGAATGCACTGTCCAGCCGGCATCTTCGGACCCTTGTTTGTAACTCTTGTAGGTACCATCTTGCTTATGTGCAGTGTTTGGATCACAAAATATTAATTTGTCAAGAGTGTGATCAGAAGCTGCACGATGTWTCTTTACCACATCGAAAACGAGCTATCAGAAGTTTCATGGGTTGCCCTTCTGCTAAAGACTTTGCGATGCTATGGTGTTTTGGCTTGAATGAGATGGAAAACATCACCTGTGAGGATTTGTTTGGATCTGCTTCATGTGTTTCCGCTGATTCAAATATGGCACAAGCCTCTGTACGGGCTAGAAGTCGAATATCATCTAAGGCCAAACTTCATGGGGGATCGAGCAGTCGACAAGGTCAGATATTATACAGTGATCAAGAGCGAAAAAAGATTCTGCAGCAGATTATTGATTTAAAACAGCTTCAGCTAAATGAGAATACTGYTCAAACSATAAAGATAAATGGACCTGAAGAAGAAACAGACTTAACTTCTTCAGCATATCAAACTATCAAGAAATCAGATGAAAAGTTCAATAAGCAAGAACAAAATTCAAAGGATGTTGTGGAAAAAGACAGTCACACAGTGGAGCTGAATCCTGAACCTTTGCCTTCTACGTTTTCTCAGCTTGATAACTTACCTTCAATTGTAGATCTTCCCTTACATGGAGAGTTGTTCTGGACAGGGAAAAGTCCACCCCGAAGTAATCAGTTGTGGTCCCAAAACATACAAGACCTTGGGATATGTGAAGAACTTGTTTGTCGAGATGATTTCAACATACCTGACGTTGATCTAACATTCCAAAACTTTGAGGAACTATTTGGAGATCAAGATCCAGTTAGAGCACTGCTTGATGATAATGATGTTTCCTGCTCCTCTTTAGAGAAGGATATGTCAATTGATAAGTCAGATATTGACAATCTAAGTGCAATAGAGGATTCTTCGGCAGCCATATCAATTACCATCTTGCAATCAGCTCGTGAGAACAAGGATATCGATAGTACCAACATCCAGCATTATCCAAGAAGCACAGATCCTCCACACACAATTCGACCATTCGAGTCAACTGTGTCATCGTCTGTTTCAAGATTCTGGGCTGCAAGCAGTCCTACTTATCACAATGACGGTGCCCTTTCTCCCTGCAGTGAAGAGAAAGGCTATTTAGGAAATTCAGCTGAATTGGAGATATCACATATGGAGGCCACACAAAATCTCACTCTCACGTATGAAGAGAAGCCATCTCGACGGTAA 1389 0.4096 MFMFENQKGMEKVCEFCTDLRPLVYCKADAAYLCLSCDSKVHFANALSSRHLRTLVCNSCRYHLAYVQCLDHKILICQECDQKLHDVSLPHRKRAIRSFMGCPSAKDFAMLWCFGLNEMENITCEDLFGSASCVSADSNMAQASVRARSRISSKAKLHGGSSSRQGQILYSDQERKKILQQIIDLKQLQLNENTXQTIKINGPEEETDLTSSAYQTIKKSDEKFNKQEQNSKDVVEKDSHTVELNPEPLPSTFSQLDNLPSIVDLPLHGELFWTGKSPPRSNQLWSQNIQDLGICEELVCRDDFNIPDVDLTFQNFEELFGDQDPVRALLDDNDVSCSSLEKDMSIDKSDIDNLSAIEDSSAAISITILQSARENKDIDSTNIQHYPRSTDPPHTIRPFESTVSSSVSRFWAASSPTYHNDGALSPCSEEKGYLGNSAELEISHMEATQNLTLTYEEKPSRR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4564 462 CDD Bbox1_BBX-like 13 56 - -
Amo19g4564 462 SMART bboxneu5 9 56 IPR000315 GO:0008270
Amo19g4564 462 SMART bboxneu5 57 96 IPR000315 GO:0008270
Amo19g4564 462 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 10 427 - -
Amo19g4564 462 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 10 427 - -
Amo19g4564 462 ProSiteProfiles Zinc finger B-box type profile. 52 96 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4564 Amo-Chr19 163158517 163162739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4564 8 342 C2C2-CO-like Transcription Factor Family AT1G68190 38.012 3.39e-60 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4564 19 163158517 163162739 Amo19g4564 19 163158517 163162739 ECH