Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4163 ATGGGTGCTCTTGATTTCCTTTCAGATTACTTCTCAGTGTCGAGGACCCCAAGAAAGAAACGGAAGCCAATGCAGACGGTGGAAATAAAGGTGAAGATGGACTGTGATGGGTGTGAGAGGAGAGTAAGAAACTCAGTTGCAAACATGAAAGGAGTGAAACAAGTGGAGGTGAATAGGAAACAGAGCAAGGTAACAGTGACAGGGTATGTGGATAGAAACAGAGTTCTGAAGAAAGTGCAGAGCACAGGGAAGAGAGCAGAGTTCTGGCCTTACATTCAATATAACTTGGTTGCATACCCTTTTATTTCTCAAGCTTATGACAAGAAGGCTCCTTCTGGTTATGTCAAGAACACTGATCTCGCCCTCCCTAACCCCAATGCTCCCCATGAGAAGCTTGCTACTCTCTTCAGTGATGATAATCCTAATTCCTGTTCCATCATGTAA 444 0.4414 MGALDFLSDYFSVSRTPRKKRKPMQTVEIKVKMDCDGCERRVRNSVANMKGVKQVEVNRKQSKVTVTGYVDRNRVLKKVQSTGKRAEFWPYIQYNLVAYPFISQAYDKKAPSGYVKNTDLALPNPNAPHEKLATLFSDDNPNSCSIM* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4163 147 SUPERFAMILY HMA, heavy metal-associated domain 23 90 IPR036163 GO:0046872
Amo19g4163 147 ProSiteProfiles Heavy-metal-associated domain profile. 33 88 IPR006121 GO:0046872
Amo19g4163 147 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 147 - -
Amo19g4163 147 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 147 IPR045181 GO:0046872
Amo19g4163 147 CDD HMA 28 87 IPR006121 GO:0046872
Amo19g4163 147 Pfam Heavy-metal-associated domain 30 84 IPR006121 GO:0046872
Amo19g4163 147 Gene3D - 12 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4163 Amo-Chr19 158137014 158137688 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4163 19 158137014 158137688 Amo19g4163 19 158137014 158137688 ECH