LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo19g4127	ATGGAGATGAAGAGGGAGAATCACAAAGGGAAGGCGTTGAATCTGCTTCGAAGCAGAGTCTGTGACCCCAAATTCGCGTTCAAGGCACTCTATAATTCTCCAGAGAGCAACTATAGCAAGCTTAAATTCATGATTTCTAGTTCCGTTACTGAGGCTTGCAACAATTCCATTCTCCTTCTCGGTCCTCGCGGCTCCGGCAAGATTTCCGTGTTGGAGCTTGTCATTCGGGATTTGCTGGATGAATATCCCGAGTCAATTTCAGTGATCAGGTTAAGTGGACTTCTACATGGCGATGACATTTCAGCATTCAAGGAAATAGCTAGGCAGTTATGTATGGAGCATCAGTTACTATTCTCAAAATCGGCATCGTTTGATGACAACTCCCAATTTATGGTAGCAATGCTAAAGGAATGTGGATTGGCACATAAAACAGTCATTTTTGTTTTGGATGAGTTTGACCTCTTTGCTCAGGGCAAACAGCGGTTACTTTATAGCCTCTTGGATGCAATGCAATCAGTAACATCACAGGCTGTTGTAGTTGGCATTAGCTGTCGGCTGGATGCTGATCAGCTGTTGGAGAAAAGAGTACGATCTCGATTTTCACATAGAAAGCTGTTGTTTACTCCGCCTTCAATGGAAGACTCACAGAGCTTGCTGGTGCACATGCTTACGATACCAGTAGATTCAAGCTTTCCCCGTGATTATGCTATTGAATTTAATAGAAAGGTCCAAAATATTGTAGAAGACAAAAGGTTCAAAGAAACCTTCAGTAACTATCTAAATTTTGACTCCTCTGTTAAGCATTTGCTAAAGTTCCTATTCTGTGCTATCTCTCATATGGATTTGAAGACTGGGTTTCTGTCCCTTGAGAACTTCAAAACCGCATTTTCAAGTATTAATAGGCAACCAAAACTGGAATGTCTAAGAAAACTTTACATTTTGGTTTGCATGAAGAGGTTGGAAGTTAAAGAGAAAAGCTTCTGCAACTTCAATTCTGTTATGAAAGAGTATAAAAGTATACATGATTCCTTCCAGACTTCTGATTACTATGATCGAAATGTCTGCTTAAGGGCATTTGAACACCTTATAAATCGGGAATTAATATGCTTCGCAGACAATAGAGGGCATAGTTTGTCCGTTGAATATCGTCCTGTAAAGCTTTTAATCTCATCTGCTGAACTGAATCAGGGACTAAGAGCATATCATTCATGCCCCGCTATTCTTCAAAAGCTAATGGATCGTGAAGGCTAG	1251	0.4053	MEMKRENHKGKALNLLRSRVCDPKFAFKALYNSPESNYSKLKFMISSSVTEACNNSILLLGPRGSGKISVLELVIRDLLDEYPESISVIRLSGLLHGDDISAFKEIARQLCMEHQLLFSKSASFDDNSQFMVAMLKECGLAHKTVIFVLDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVVGISCRLDADQLLEKRVRSRFSHRKLLFTPPSMEDSQSLLVHMLTIPVDSSFPRDYAIEFNRKVQNIVEDKRFKETFSNYLNFDSSVKHLLKFLFCAISHMDLKTGFLSLENFKTAFSSINRQPKLECLRKLYILVCMKRLEVKEKSFCNFNSVMKEYKSIHDSFQTSDYYDRNVCLRAFEHLINRELICFADNRGHSLSVEYRPVKLLISSAELNQGLRAYHSCPAILQKLMDREG*	417

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo19g4127	416	Pfam	AAA ATPase domain	39	175	IPR041664	-
	Amo19g4127	416	Pfam	Origin recognition complex (ORC) subunit 4 C-terminus	219	396	IPR032705	-
	Amo19g4127	416	PANTHER	ORIGIN RECOGNITION COMPLEX SUBUNIT 4	10	415	IPR016527	GO:0000808\|GO:0003677\|GO:0005634\|GO:0006260
	Amo19g4127	416	Gene3D	-	34	209	IPR027417	-
	Amo19g4127	416	CDD	AAA	55	203	-	-
	Amo19g4127	416	PIRSF	ORC4	2	416	IPR016527	GO:0000808\|GO:0003677\|GO:0005634\|GO:0006260
	Amo19g4127	416	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	48	266	IPR027417	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo19g4127	3	413	Core DNA Replication Machinery Family	AT2G01120	65.012	0.0	559

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo19g4127	19	157827201	157830532	Amo19g4127	19	157827201	157830532	ECH