Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4126 ATGAATATTACTACTATTACTACTATTGTCTCATATCCAGCATCTGCATATGTTGTGAGGTGTTGTTCCAAACATGAAAGGCATAGTAAGCAACAACCAAACAACATCGTGATTAATGGGACTACTCTAAGGTCTTCGGCAGTTAAGGTTGTTGAGTCAGTTGTCGCCTCAACCACTCTTGATCACTCTGTTGTTACTGTTAATGGGAACAATAATGGACAGCGCCAGAATATCCCAACAAAGAAGCAGCTTGTTGATCCTCATAGGCAAGGTCTCATGGTTGAAGGTGGAGTTGGTTATAGACAAACTATTGTTATTAGATCCTATGAAGTTGGACCTGACAAAACTGCAACACTTGAGAGCATCCTCAACCTTCTTCAGGAGACTGCATTAAACCATGTGTGGATGTCTGGACTTCTTGGTGATGGGTTTGGTGCAACTCATGGAATGATAAGGAATGATCTCATTTGGGTTGTCTCAAGAATGCAAAATCAAAGAAAACTTAATAAGGGAGAGGTAGTTGAAATTGACACATGGGTTGGAGCATCCGGCAAGAATGGAATGCGGCGCGATTGGCTGATCAAAAGTCAGGCAACCGGCCACATTTTTGCTCGTGCAACAAGTTTAGCACTGTATGCACTCAGCACATGGGTGATGATGAACCGAAAAACGAGACGCCTCTCTAAGATGCCTGAAGAGGTGAGGGATGAACTTGTACCTTGGTTTATTGAGAAGCAAGCAATAGAGGAAGAAGCTCCAGAAAAGATTGTCAAATTGAACAAGCAAGCAAAATACATGAACTCTGACTTGAAGCCCAAAAGAAGTGATTTGGACATGAACCAGCATGTTAATAATGTGAAGTATGTACGATGGATGTTAGAGACTATTCCAGACCATGTTCTAGAGGGTCACCAATTATCAGGCATCACACTAGAATACAGAAGGGAATGTGGGAGTGCAGATATAGTTGAATCATTATGTGAACCTGAAGAAGATGAGATGGTTAGTAATTTAATGGAACAACACTACAACACAAGTTTACTCAATGGCTTGTCTTTGGCATCATCATCAGCAGCAGAGATTATAAATGGTGGTGGAGTCCTCACTTGCATTGATCAAATTCAAAGGCCAATAAGGTATACACACCTTCTACAAACCAAAGGAGAGAAACAAAATGATGAAATTGTCAGAGGCAGGACTTCATGGAAGAGGAAGCTCCCTACCATGCATCTTCCACCTAATACTCTATGTGGCATGTAG 1260 0.4143 MNITTITTIVSYPASAYVVRCCSKHERHSKQQPNNIVINGTTLRSSAVKVVESVVASTTLDHSVVTVNGNNNGQRQNIPTKKQLVDPHRQGLMVEGGVGYRQTIVIRSYEVGPDKTATLESILNLLQETALNHVWMSGLLGDGFGATHGMIRNDLIWVVSRMQNQRKLNKGEVVEIDTWVGASGKNGMRRDWLIKSQATGHIFARATSLALYALSTWVMMNRKTRRLSKMPEEVRDELVPWFIEKQAIEEEAPEKIVKLNKQAKYMNSDLKPKRSDLDMNQHVNNVKYVRWMLETIPDHVLEGHQLSGITLEYRRECGSADIVESLCEPEEDEMVSNLMEQHYNTSLLNGLSLASSSAAEIINGGGVLTCIDQIQRPIRYTHLLQTKGEKQNDEIVRGRTSWKRKLPTMHLPPNTLCGM* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4126 419 Pfam Acyl-ACP thioesterase 99 387 IPR002864 GO:0006633|GO:0016790
Amo19g4126 419 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 16 406 IPR045023 GO:0006633|GO:0016297
Amo19g4126 419 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 16 406 - -
Amo19g4126 419 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 97 248 IPR029069 -
Amo19g4126 419 Gene3D Hotdog Thioesterase 92 408 - -
Amo19g4126 419 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 269 332 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4126 Amo-Chr19 157823133 157825439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4126 84 408 Acyl Lipid Metabolism Gene Families AT1G08510 44.207 6.01e-86 266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4126 19 157823133 157825439 Amo19g4126 19 157823133 157825439 ECH