Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4123 ATGGCCGCGTGTGCAAGCTTCGCCAAGCTCAGCTCCTTGTCTTCCCCCTGGATCTCCAACAACTCCTTCTCTTCCCGCACCGGATCCTCGTCTCTCCTCGCCACTCGCCGTGTCTCCCTCCCGATCCGCGCCACCTCTTACTCCGACGAACTCGTCAAAACCGCTAAAACTATTGCATCTCCTGGTCGTGGAATTCTTGCCATTGATGAGTCCAATGCCACCTGTGGGAAGCGGTTGGCATCGATAGGATTGGACAACACCGAGGTCAATCGTCAGGCCTACAGGCAGCTTCTGCTGACCACACCCGGCCTTGGTGAATACATTTCTGGTTCCATTCTCTTTGAGGAAACCCTTTACCAGTCAACAACCGATGGAAAGAAGTTTGTTGATTGCCTTCGTGAGCAGAACATTGTGCCTGGCATCAAAGTTGATAAGGGCTTGGTCCCACTACCAGGATCAAACAATGAATCTTGGTGCCAAGGGCTAGATGGATTGGCTTCAAGATCTGCTGAATACTACAAGCAAGGTGCTCGATTTGCCAAGTGGCGGACAGTTGTTAGCATTCCATGTGGTCCTTCTGCATTAGCTGTTAAGGAAGCAGCATGGGGACTTGCACGATATGCTGCTATCTCTCAGGACAATGGCCTTGTTCCAATTGTAGAGCCGGAAATTCTTCTAGATGGTGATCACCCGATTGAGAGGACATTAGAAGTGGCAGAGAAGGTCTGGTCAGAAGTCTTCTTTTATTTGGCTCAAAACAATGTCATTTTTGAGGGAATTTTGCTCAAACCTAGCATGGTTACACCTGGGGCCGAGCACAAGGAAAAGGCTTCTCCAGAAACCATTGCCAAATATACACTTACCATGCTTAGAAGAAGAGTTCCTCCTGCAGTCCCTGGAATCATGTTCTTGTCTGGTGGACAATCTGAAGTGGAAGCAACACTGAACCTTAACGCAATGAACCAAAGTCCCAACCCATGGCACGTTTCATTTTCATATGCACGAGCTCTGCAGAACACTGTGCTCAAGACATGGCAAGGACGCCCCGAGAATGTGGAAGCGGCTCAAAAGTCTCTTTTGGTGCGCGCAAAAGCAAACTCCTTGGCTCAGTTGGGAAGATATTCTGCCGAGGGTGAAAGCGAAGAAGCCAAGAAGGGAATGTTTGTCAAGGGCTATACCTACTAG 1185 0.4937 MAACASFAKLSSLSSPWISNNSFSSRTGSSSLLATRRVSLPIRATSYSDELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGSILFEETLYQSTTDGKKFVDCLREQNIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVIFEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGRPENVEAAQKSLLVRAKANSLAQLGRYSAEGESEEAKKGMFVKGYTY* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4123 394 SUPERFAMILY Aldolase 41 394 - -
Amo19g4123 394 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 394 IPR000741 GO:0004332|GO:0006096
Amo19g4123 394 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 255 265 IPR029768 -
Amo19g4123 394 CDD FBP_aldolase_I_a 48 374 - -
Amo19g4123 394 Gene3D Aldolase class I 29 393 IPR013785 -
Amo19g4123 394 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 29 394 - -
Amo19g4123 394 Pfam Fructose-bisphosphate aldolase class-I 50 394 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4123 Amo-Chr19 157770437 157773521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4123 45 394 Miscellaneous Gene Families AT3G52930 55.085 1.24e-133 385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4123 19 157770437 157773521 Amo19g4123 19 157770437 157773521 ECH