Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4118 ATGATTAACAATGACTTACATACATACATACATAATGAAAATTTGGTCAAAGACTCGCAAAATATCAACTCATGGAGTTTTTATCAATCACAAAACCATACTATAACTTTGACTATTCATTTGCTTCCGTGTTGCTTGCTTAATTTGTTCAACCAAGCTCTTAGCTGGTGGAGTCTTGTATTCAACATGACACTCCAAACTCATGTGGTGGTCGACGCTTCTTCTTCTCTTGATTCAGGCCATGCACGTCTTCATGAACTCGGTTACAAGCAAGAGCTCAAGCGTGATCTTTCGGCTATCTCAAATTTTGCATTCTCGTTTTCTATTATATCGATCCTGACCGGAGTAACCACACTTTACAACACTGGCTTGAACTATGGTGGACCTTTTTCAATGGTCTACGGGTGGCTTATTGCTGGTTTTTTCACCATGTTTGTTGCTTTATCAATGGCTGAGATTTGTTCAGCTTATCCAACTTCTGGTGGTCTCTACTATTGGAGTGCTAAGCTTGCTGGCCCAAATTGGGCACCTTTTGCTTCTTGGATCACTGGCTGGTTTAATATTATTGGTCAGTGGGCAGTGACAACAAGTGTAGATTTCTCATTAGCACAACTGATTCAGGTCATTGTTCTGCTTAGCACTGGTGGAAAAAATGGAGGTGGATATGAAGCATCTAAATATGTAGTTATTGCTATTCATGGTGGAATTTTGCTCCTCCACGGTATATTGAACACCCTTCCTATCTCAGTGCTATCATTCTTTGGACAATTTGCTTCTATTTGGAATGCAATAGGTGTTTTTGTGCTTATGATTCTGATTCCGATTGTTGCGACCCAAAGGGCTAGTGTTAAGTTTGTTTTCACTCATTTCAATACTGATAATGGTGCCGGAATCAGTAGCAGTCCCTACATATTTCTGGTGGGACTTCTTATGGCTCAGTATTCTCTATCTGGATATGATGCATCAGCTCATATGACAGAAGAGACCAAAGAAGCTGATAAAAATGGACCAAAAGGAATTATCAGTGCTGTGGGAATATCTATTGTTCTTGGATTCTGCTACATATTAGGAATTACCTTTGCAGTTACTAACATCCCTTACCTGTTAAGTACAGACAATGATGCTGGTGGATATGCCATTGCTCAAATATTTTATATGGCATTCAAGGACAGATATGGTCATAGTATTGGAGGGATTATCTGCTTGATCATTGTTGCTGTAGCTATATTTTTTTGTGGTATGAGTTCAGTGACTAGCAACTCAAGGATGGCTTATGCTTTCTCAAGAGATGAGGCCATGCCATTGTCTTCCTTGTGGCGAAAGGTTAACAAGCAAGAGGTCCCTATCAATGCAGTTTGGCTTTCTGTTTTTATATCATTCTGTATGGCACTGACGTCTCTTGGGAGCATGGTGGCATTTCAGGCCATGGTGTCCATAGCAACAATTGGTCTCTACATAGCATATGCACTCCCAATATTCTTCAGGGTGACACTGGCAGCAAAGTACTTTGTGCCTGGGCCTTTCAATTTGGGCCGTTTTGGGCTCGTTGTGGGCTGGGTTGCAGTTCTATGGGTTTTGACAATCTCAGTACTCTTCTCACTGCCTGTTTCCTACCCAATAACCATAAAGACACTTAACTACACACCTGTGGCCGTTGGATGTTTGCTAATTTTAGTAGTTTCTTATTGGATAATCAGTGGTAGGCATTGGTTTAAAGGCCCTGTAACCAACCTCAAATACTAA 1743 0.4073 MINNDLHTYIHNENLVKDSQNINSWSFYQSQNHTITLTIHLLPCCLLNLFNQALSWWSLVFNMTLQTHVVVDASSSLDSGHARLHELGYKQELKRDLSAISNFAFSFSIISILTGVTTLYNTGLNYGGPFSMVYGWLIAGFFTMFVALSMAEICSAYPTSGGLYYWSAKLAGPNWAPFASWITGWFNIIGQWAVTTSVDFSLAQLIQVIVLLSTGGKNGGGYEASKYVVIAIHGGILLLHGILNTLPISVLSFFGQFASIWNAIGVFVLMILIPIVATQRASVKFVFTHFNTDNGAGISSSPYIFLVGLLMAQYSLSGYDASAHMTEETKEADKNGPKGIISAVGISIVLGFCYILGITFAVTNIPYLLSTDNDAGGYAIAQIFYMAFKDRYGHSIGGIICLIIVAVAIFFCGMSSVTSNSRMAYAFSRDEAMPLSSLWRKVNKQEVPINAVWLSVFISFCMALTSLGSMVAFQAMVSIATIGLYIAYALPIFFRVTLAAKYFVPGPFNLGRFGLVVGWVAVLWVLTISVLFSLPVSYPITIKTLNYTPVAVGCLLILVVSYWIISGRHWFKGPVTNLKY* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4118 580 PIRSF AA_transporter 84 576 - -
Amo19g4118 580 PANTHER AMINO-ACID PERMEASE BAT1 71 579 - -
Amo19g4118 580 Gene3D Amino acid/polyamine transporter I 91 572 - -
Amo19g4118 580 Pfam Amino acid permease 97 552 IPR002293 GO:0016020|GO:0022857|GO:0055085
Amo19g4118 580 ProSitePatterns Amino acid permeases signature. 127 158 IPR004840 GO:0006865|GO:0016021|GO:0055085
Amo19g4118 580 PANTHER AMINO-ACID PERMEASE BAT1 HOMOLOG 71 579 - -
Amo19g4118 580 TIGRFAM 2A0304: amino acid permease 84 574 IPR004756 GO:0006865|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4118 Amo-Chr19 157645038 157652967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4118 144 578 Organic Solute Cotransporters AT2G01170 75.402 0.0 645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4118 19 157645038 157652967 Amo19g4118 19 157645038 157652967 ECH