Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4093 ATGGTTGAGAGAATCAAATCCTTTGTTGAATTGAGCATGTATGAATTTGTTGTTTTGGTATTGATGCTTGTGGTGGCCGCAGCCACCGGAGAGAGAAGAGAATGTCCAGCTTCATTCAATTGTGGATATGTTGGGAACATCAGCTTCCCTCTCACTACAGCAGAGCGTCAGGAGTGTGGCCTTTTGGCCATAAACAATTGTTACAAGCCAGCGCAGGAGGATAGATGGGTGCAACTAAGTGATGAAGGCAAAACATTTATAGTTATACGCGTATCTCAACAGAATTTTACCAGTATTCAATTCAGAGATAAGCACTTATACGATCTTCTGCAATCAAGAAATTGTAATGCCTTCAGATATAACTATACTCTTTCTACTCCTCCCACCTTTCATCATTTTGCTTCCCTTTATATGGAATACAATACAACCCTCCACACATGCAACCCTACTCTCCGTGTCCCCCCAACTAAGAACATGTTCCGTTATGCAAATTGCACTGACATCCATATCTATTACGGCCTTTTCAATCACACACCACAAATTCAGAAATCGTTGGCCTCATGCACAAAGGTGGTGCTTCCAATCAAAGATGTTCCTGATGGCAATGATCCATTCACATTCGTAAATGCTGATATCATCGCTAAGGTCATTTTGTCGCAAGAATGCACAGACTGTCACTATAAGCAAAGAGGCCAGTGCCAACTTGACAGCAAAAGTAAATTTTGTTGTGCCAACGTTAGGCCGCCGGAAAATACAAGGAAAAAAGATCTGAGTAAGAAGGCTAAATTGGGTCTAGGCAGCAGCCACTTTGAATCAAGATACTCTTATTCTGATTCCTCTTCCAATCCACACCTAGATAATGGTGCTGCTTACCTCGGAGTTCCACTCTTCTCCTACAAGGATCTTAAAGAAGCAACAAACAATTTTGACCATAACAAAGAACTTGGAGATGGAGGCTTTGGCACTGTCTACTACGGGAAACTCCAAGATGGAAGAGAAGTTGCTGTGAAGCGCTTGTATGAGCACAACTACAGGAGAGTAGAGCAATTCATAAATGAAGTTCAGATTCTAACACGTTTGAGACACAAAAATCTTGTGTCTCTCTACGGCTGCACTTCGCGCCACAGCCGCGAACTGCTGCTTGTATATGAATATATTTCTAATGGCACGGTTGCTTGTCATCTCCATGGAGAATCAGCCAAGCGCAGCTTACTACCTTGGTCTACAAGAATCAAAATCGCCATAGAGACTGCTACTGCATTGGCTTATCTTCATGCTTCTGACATCATTCACCGTGATGTGAAGACCAACAACATTCTCCTTGACCATAACTTTACTGTCAAGGTTGCAGATTTTGGCCTTTCAAGACTATTCCCCATGGATGCAACCCATGTATCCACCGCGCCACAAGGGACTCCTGGTTATGTTGACCCTGAATATCACCAGAATTACCAGCTTACTAGCAAGAGTGATGTGTATAGTTTCGGAGTTGTGCTCATTGAGCTAATATCATCCATGCCTGCAGTTGATATGAACAGGGATAAGGATGAGATTAACTTATCAAATCTAGCCATGAAGAAGATTCAAAATAGTGCAATTATTGACTTGGTTGATCGTTCTCTCGGTTTTGATTCAGACAATAAGGTAAGGAGAATGATAGTTTCGGTGGCGGAGTTGGCTTTTCAGTGTTTGCAAAGAGACAAGGAGTTGAGACCTTCCATGGACGAAGTCTTGGATGAACTGAAGAAGATTGAGAGTGGGAAGGATCATGCAGAGCTTCAAGAGGAAGCTGATGTTGATGGTAATGAAGTTTCTCACAATAAGATTGTACATTCACTTCCACCACCTTCACCTGAATGGGATGAAGTTGGATTATTGAAGCATATGAAGATACCACCACCTTCACCAATCACTGTCACTGATAATTGGGAAAAGCATCCTGAGTGTGGGTTGTTACCAATTCAAGGCTGCCTCCTCAGTGCTACTTCACCAAAATTGATCCAACTTGGCAACAATAGCAAAAGCGTGAACCTTACTGCTGTAGTTGAGACCAATAAGATCATTACAATCTATGATGATGGCTTCCACACAAGTTTGGATCACAACAAATGTGACACTTTGCACAATAATTACACCCTTCCTCCACCTTCTCCATTTTTGTCTATGTATATCAAGTACAATGTAACTCTCTTCAAATGCAATCACAACCTTAGTACCAAGCCCCCTTCCAATTATGTTAATCTAGGATGCCGCGTCTCCTACGGCTATGAAATCTATTATGATAGATCCAATACCAATCCTGATCAAGAGGCGGCCGGAGTTTTTTCCGGCTGCTCGGTTGTCCAGTTTGCTTCAAAAGACTCCACCAATACCAAAGACGTTTTGTCCTTCGTTTCTGCTGAGATGGTTCTTGAAATAGTATTATCTCATGACTGTGATGACTGCTTCAATCACAGAGGAGGCCTTTGTAGACTTGACAACAATAACCACTTTTACTGCCACTTAGATCCCAAGAGCAATAAAGCCTTGAAGATCGGACTCGGAATAGGTTTAGGTGTTGGTGTCACCCTGCTATGCATTTTGATCCTTGTATACTTGTTTAGACGAAAACATGGTCCTTCAGATCTTCAATACCAATCAAGAAGCACACACAGTGATTTGAATGATCTCTCTAGAAATGCAGACCCAGAAAGCGGAAGGGACTACTTTGGAGTCCCTCTCTTCTCTCACGAGGAGCTCAGTGAAGCTACAAATAATTTCCATCACTCCACCCAAGTTGGACATGGAGGCTTTGGAACTGTTTACTATGGAAAACTGCGAGATGGACGGGAAGTTGCTGTGAAGCGCCTCTATGATCACAACTACAGGAAAATGGAACAGTTTATGAACGAAATTGAGATCCTTACTGGCATGCGCCACAGAAACCTTGTGTCCCTCTATGGTTGCACCTCACGCCACAGTCGAGAATTATTGCTTGTGTATGAGTATGTTTCAAATGGAACTGTTGCTGCTCATCTCCATGGTGATTTAGCAAGGAGTGAAACACTGCCATGGAACATAAGGATGAAGATTGCCATTGAGACTGCAAGTTCATTGTCATATCTCCATGCCTCTGACATCATTCATCGTGATGTTAAAACCAATAACATTCTCCTTGACCACCATTTTTGTGTTAAGGTTGCGGATTTCGGCCTTTCAAGACTCTTCCCCAGTGATGTAACCCATGTCTCCACAGCACCACAAGGGACTCCAGGCTACGTTGACCCTGAATATTACCGCTGCTACCAGCTTACTAGCAAGAGTGATGTTTATAGTTTCGGAGTGGTGCTCATTGAGCTTATATCTTCTAAGCCTGCTGTTGATATGGACAGGCACAAGGATGAGATTAACTTGTCTGATTTAGCCATAAACAAGATTCAAAAGAGTGCATTTAGCGAGCTGGTAGATCCTTCTCTTGGTTTTGATTTGGATAGTGAGGTAAAGAGGATGATAGTTTCCGTGGCAGAATTGGCTTTTCAGTGTTTGCAACGGGATAGGGCATTGAGGCCTTCCATGGATGAGGTTTTAAGGGCGCTGATCATTATTGAAAGTGGGAAGATTAAGGATGAAGCTGAAGAGGTAGAGGCACATGTACATACACCACCATCCCCGGATTTGAATGATGCTGCTGAAAGAATAAAGTAG 3684 0.427 MVERIKSFVELSMYEFVVLVLMLVVAAATGERRECPASFNCGYVGNISFPLTTAERQECGLLAINNCYKPAQEDRWVQLSDEGKTFIVIRVSQQNFTSIQFRDKHLYDLLQSRNCNAFRYNYTLSTPPTFHHFASLYMEYNTTLHTCNPTLRVPPTKNMFRYANCTDIHIYYGLFNHTPQIQKSLASCTKVVLPIKDVPDGNDPFTFVNADIIAKVILSQECTDCHYKQRGQCQLDSKSKFCCANVRPPENTRKKDLSKKAKLGLGSSHFESRYSYSDSSSNPHLDNGAAYLGVPLFSYKDLKEATNNFDHNKELGDGGFGTVYYGKLQDGREVAVKRLYEHNYRRVEQFINEVQILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGESAKRSLLPWSTRIKIAIETATALAYLHASDIIHRDVKTNNILLDHNFTVKVADFGLSRLFPMDATHVSTAPQGTPGYVDPEYHQNYQLTSKSDVYSFGVVLIELISSMPAVDMNRDKDEINLSNLAMKKIQNSAIIDLVDRSLGFDSDNKVRRMIVSVAELAFQCLQRDKELRPSMDEVLDELKKIESGKDHAELQEEADVDGNEVSHNKIVHSLPPPSPEWDEVGLLKHMKIPPPSPITVTDNWEKHPECGLLPIQGCLLSATSPKLIQLGNNSKSVNLTAVVETNKIITIYDDGFHTSLDHNKCDTLHNNYTLPPPSPFLSMYIKYNVTLFKCNHNLSTKPPSNYVNLGCRVSYGYEIYYDRSNTNPDQEAAGVFSGCSVVQFASKDSTNTKDVLSFVSAEMVLEIVLSHDCDDCFNHRGGLCRLDNNNHFYCHLDPKSNKALKIGLGIGLGVGVTLLCILILVYLFRRKHGPSDLQYQSRSTHSDLNDLSRNADPESGRDYFGVPLFSHEELSEATNNFHHSTQVGHGGFGTVYYGKLRDGREVAVKRLYDHNYRKMEQFMNEIEILTGMRHRNLVSLYGCTSRHSRELLLVYEYVSNGTVAAHLHGDLARSETLPWNIRMKIAIETASSLSYLHASDIIHRDVKTNNILLDHHFCVKVADFGLSRLFPSDVTHVSTAPQGTPGYVDPEYYRCYQLTSKSDVYSFGVVLIELISSKPAVDMDRHKDEINLSDLAINKIQKSAFSELVDPSLGFDLDSEVKRMIVSVAELAFQCLQRDRALRPSMDEVLRALIIIESGKIKDEAEEVEAHVHTPPSPDLNDAAERIK* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4093 1227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Amo19g4093 1227 Gene3D Transferase(Phosphotransferase) domain 1 386 599 - -
Amo19g4093 1227 Gene3D Transferase(Phosphotransferase) domain 1 997 1206 - -
Amo19g4093 1227 MobiDBLite consensus disorder prediction 875 894 - -
Amo19g4093 1227 Gene3D Phosphorylase Kinase; domain 1 893 996 - -
Amo19g4093 1227 Gene3D Phosphorylase Kinase; domain 1 283 385 - -
Amo19g4093 1227 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 645 1203 - -
Amo19g4093 1227 ProSiteProfiles Protein kinase domain profile. 309 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4093 1227 ProSiteProfiles Protein kinase domain profile. 920 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4093 1227 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 647 IPR044652 -
Amo19g4093 1227 Pfam Protein tyrosine and serine/threonine kinase 312 581 IPR001245 GO:0004672|GO:0006468
Amo19g4093 1227 SUPERFAMILY Protein kinase-like (PK-like) 292 585 IPR011009 -
Amo19g4093 1227 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 13 647 - -
Amo19g4093 1227 ProSitePatterns Protein kinases ATP-binding region signature. 926 948 IPR017441 GO:0005524
Amo19g4093 1227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1040 1052 IPR008271 GO:0004672|GO:0006468
Amo19g4093 1227 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 645 1203 IPR044652 -
Amo19g4093 1227 SUPERFAMILY Protein kinase-like (PK-like) 901 1194 IPR011009 -
Amo19g4093 1227 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Amo19g4093 1227 MobiDBLite consensus disorder prediction 1206 1227 - -
Amo19g4093 1227 SMART serkin_6 920 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4093 1227 SMART serkin_6 309 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4093 1227 Coils Coil 574 594 - -
Amo19g4093 1227 Pfam Protein kinase domain 920 1190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo19g4093 1227 CDD STKc_IRAK 315 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4093 Amo-Chr19 157338146 157347434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4093 25 643 Receptor kinase-like Gene Family AT1G25390 47.205 4.17e-165 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo19g4093 Pkinase 6.3e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4093 19 157338146 157347434 Amo19g4093 19 157338146 157347434 ECH