Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4090 ATGGCCTCCGGTGAAGGGAGGCGTCGTCACCATGATCTTGTGCCTCTTGCTGCATTGCTTAAGAGGGAGATGAAGAGTGAGAAGATGGAGAAGCCCACTGTTAGATATGGTCATGCCGCTCAGTCTAAGAAAGGGGAAGATTACTTTCTAGTCAAGACTGATTGTCAGCGAGTACCCGGGAACCCTTCAACTTCCTTTTCTGTTTTTGCGATCTTTGATGGACACAATGGAAATGCTGCAGCCATTTTTGCTAGAGAGCATTTGTTAAATCATGTGTTGAGTGCTCTTCCTCGAGGGCTTGGACGAGATGAGTGGTTGCAAGCTTTGCCTAGGGCATTGGTTGCGGGATTTGTTAATACTGATAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACCACAGCTACGTTTGTGATAGTGGATAGGTGGACTGTGACAGTTGCATCTGTTGGAGATTCCCGTTGTATACTAGATACACAGGGTGGTGCTGTTACCACCTTAACGGTTGATCACAGACTTGAAGAAAATATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGTGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGCTGAGATTGGTCCTCTTCGTTGCTGGCCTGGGGGTCTATGCCTTTCAAGGTCAATAGGAGATATGGATGTTGGGGAGTTCATAGTTCCAGTACCATATGTCAAACAAGTGAAGCTATCAAATGCTGGTGGTAGGCTTGTAATTGCTTCTGATGGCATCTGGGATGCCGTGTCCTCCGAAGTGGCTGCTAAATCTTGTCGTGGTTTGCCTGCTGAACTTGCGGCTACGCAGGTTGTGAAGGAAGCACTAAGGACAAGAGGGTTAAAGGATGATACAACTTGTATAGTAGTTGACATAATCCCACCTGATAATGAGTTGCCACCAACTCCTCCCCCCAAAAAGCATAACAAGTTCAGAGAGCTTTTCTTCAGGAAAAGGTCCCGTGATTCTGCCGGTAAACTGTCAAAGAAGCTTTCAGCTATAAATATAGTGGAGGAACTCTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGGAGTGATGAGAACTCAGGGCAATCAACATCTGGCCTTTTTGTTTGTGCTGTGTGTCAAGTTGATCTTGCTCCAAGTGAGGGTATCTCAGTCCATGCGGGTTCCATCTTTTCCACCAGCTCCAAGCCCTGGCAAGGACCTTTTCTGTGCTTTGATTGTCGCGATAAGAAGGATGCAATGGAGGGAAAACGCCCCAGTGGAGTTAAAGTGTCCTAG 1287 0.4662 MASGEGRRRHHDLVPLAALLKREMKSEKMEKPTVRYGHAAQSKKGEDYFLVKTDCQRVPGNPSTSFSVFAIFDGHNGNAAAIFAREHLLNHVLSALPRGLGRDEWLQALPRALVAGFVNTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSNAGGRLVIASDGIWDAVSSEVAAKSCRGLPAELAATQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPTPPPKKHNKFRELFFRKRSRDSAGKLSKKLSAINIVEELFEEGSAMLAERLGSDENSGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCFDCRDKKDAMEGKRPSGVKVS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4090 428 Gene3D - 33 301 IPR036457 -
Amo19g4090 428 SMART PP2C_4 27 295 IPR001932 -
Amo19g4090 428 Pfam Protein phosphatase 2C 61 282 IPR001932 -
Amo19g4090 428 SUPERFAMILY PP2C-like 30 297 IPR036457 -
Amo19g4090 428 CDD PP2Cc 36 297 IPR001932 -
Amo19g4090 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Amo19g4090 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 427 - -
Amo19g4090 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Amo19g4090 428 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4090 Amo-Chr19 157271541 157274249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g4090 1 427 PP2C-type Phosphatase Gene Family AT1G68410 79.817 0.0 703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4090 19 157271541 157274249 Amo19g4090 19 157271541 157274249 ECH