Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4080 ATGAAAAGCTCAAGTAGTCAATACCCTGTAAATTCTGTTTCCAAGCTTTTCAATGCTCAACTCCATTTTGTTCGGTTTCTTACCTATATCTTGATTCTGGGGTTTGGTGTCACCATTGGAGTCATCTTTAGTTTCTACCTTAAAGACTGCACCTTTAGTCTCCAATTCACTCAGTTATCAGTCTCAGCCTTACCCCGAAAAGCGTCTATGCAGCCGCCGCCGCCACCACCACCGATCACGGAAACACAGACGTCCAATCACAGCCATGTAGGATTAAAGGAGTTCCTTAAGCCTCCTCCAATCATGCATGACATGGATGATAAGGAGCTTATGTGGAGGGCTTCAATGAGTGCAAAGATCCCTGAGTACCCCTTTGATAGAGTTCCAAAGGTGGCATTCATGTTCTTGACAAGGGGTCCTTTGTTCTTTGCACCTTTGTGGGAACAATTCTTCAAAGGGCATGAAGGGTATTACTCAATATACGTGCACTCCAATCCATCTTTCAATGCTTCACAACCTGAGAAGAATTCAGTGTTTCATGGCCGCAGAATTCCCGGCAAGGAAGTGCAATGGGGGAATGTGAACATGGTTGAAGCAGAGCGTCGCCTTCTGGCAAACGCACTCCTTGATGTCTCAAACCAAAGATTCGTTCTCTTATCGGAATCATGCATACCAATCTTCAACTTCACAACCGTCTACTCATACTTAATGAACTCAACACAAAACTATGTCATGGCCTATGATGAGAACAGTCCGGTGGGTCGCGGGCGATATAGCATCCGGATGCTGCCGGACGTGAGCCTTAGGCAATGGAGAAAAGGGTCCCAATGGTTTGAGATGGACAGAGAGCTTGCACTTGAAGTGGTATCAGACAGAAAGTACTTCCCAATTTTTCAGCAATATTGCAGAGGTTCATGTTATGCAGACGAACATTACTTGCCAACATATGTGAGCATCAATTTTTGGGAAGGGAACTCTAATAGGAGTTTGACCTTTGTTGACTGGTCAAGGGGTGGTCCACACCCAGCAACGTTCATGAGATCTGAGGTCACTGTGGAGTTCTTGGAGAAGCTAAGGAGCAAGAGATGCCAGTATAATGGGAACAGCACAAATGTTTGTTTTCTGTTTGCTAGGAAGTTCTTGCCTAATACTTTGTCAAGGCTTCTCAACCTTGCACCTGAGGTCATGCACTTCTAA 1197 0.4511 MKSSSSQYPVNSVSKLFNAQLHFVRFLTYILILGFGVTIGVIFSFYLKDCTFSLQFTQLSVSALPRKASMQPPPPPPPITETQTSNHSHVGLKEFLKPPPIMHDMDDKELMWRASMSAKIPEYPFDRVPKVAFMFLTRGPLFFAPLWEQFFKGHEGYYSIYVHSNPSFNASQPEKNSVFHGRRIPGKEVQWGNVNMVEAERRLLANALLDVSNQRFVLLSESCIPIFNFTTVYSYLMNSTQNYVMAYDENSPVGRGRYSIRMLPDVSLRQWRKGSQWFEMDRELALEVVSDRKYFPIFQQYCRGSCYADEHYLPTYVSINFWEGNSNRSLTFVDWSRGGPHPATFMRSEVTVEFLEKLRSKRCQYNGNSTNVCFLFARKFLPNTLSRLLNLAPEVMHF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4080 398 Pfam Core-2/I-Branching enzyme 131 358 IPR003406 GO:0016020|GO:0016757
Amo19g4080 398 PANTHER CORE-2/I-BRANCHING ENZYME 1 64 - -
Amo19g4080 398 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 64 IPR044174 GO:0016757
Amo19g4080 398 PANTHER CORE-2/I-BRANCHING ENZYME 80 398 - -
Amo19g4080 398 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 80 398 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4080 Amo-Chr19 157196703 157199739 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4080 19 157196703 157199739 Amo19g4080 19 157196703 157199739 ECH