Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4079 ATGGCAGCTCACACACTCGCTTTGATCATCGAAAACCCTTCCAACCATCACGAGTTCCTCCTCGTCAAGCAGCCTCGCCCTCCCAAATTCCACGACCAAGAATACGATTCCTTCGTCGATTCTGATCTCTGGGACTTGCCTTCCGCTCTCTTGAATCCGTTGCAGCCAGGATCGGAGCCGCCGGTTGCGGTGGAAGTGGCTGGCTCGCATTCTGAGGAGCTCAATTTGGGTCAATTCGACATTCGTTCAGCACTCAATGAGGTATTTCTACAAATAGGGTTTGGGGAAGTTGAAGGTGGAGAGTGGAAGTTTTACAAATATATCAAGGAAGCTGCGTTTGGACCCGGTTTGCCCCATAACACAGTCTTCATTGCGGGAAAATTGGTAACTGAAGACGTTGCCTTGCTAGATTCACATAAATGGATGTCCGTCCAGAGCTGTCTTAATTTGCTTCTGGAAGTGAAGCCACAAGACGATCGTGTTGGACCATTGGTAGTCGTTGGTCATATAAACAACTCATTTGACTGTGCTAAGTGGAAAGTCCCACCAGCCATAAACTACCAGGAGTACCCTCCTGGTGTTATACTTATACCTATGGAAAGTAGAACCGCAAAGCCTTTTAGCACAACAAACTTGGTTGTATTTGCACCTGCAAATGCTTCAAATGATTGTGAGGATAATAATTTTATTGCATGTGGAGATGCACTAATTGTTGATCCAGGATGTTTATCAAGATTCCATGGAGAGCTAGAGAAAGTTGTTACTACTTTGCCAAGAAGACTAGTGGTCTTTGTTACTCATCATCACCATGACCATGTAGATGGTCTATCTGTCATACAAAAGTGCAATCCTGATGCCACCTTGTTAGCACATGAGAATACCATGCGCCGCATAAGCAAAGATGACTGGTCACTTGGCTATACCTCAGTTACTGGAGATGATGAAATTAACATTGGTGGTCAGAGATTAAGAGCTATTTTTGCACCGGGACATACAGATGGTCATTTGGCACTGCTTCACAAGAACACTCACTCATTGATTGTGGGGGATCATTGTGTAGGTCAAGGAAGTGCTGTTCTGGACATAACTTCTGGTGGAAATATGACTGAATACTTCCAAACAACATACGAATTTCTCAAGCTCTCACCACATGTTTTAATATCAATGCATGGGAGAATAAATCTCTGGCCAAAGCAGATGCTGTGTGGATATCTGAAGAACCGTAGGAATAGAGAAGCTAATATCTTGAAAGCAATTGAAGGCGGAGCGAAAACATTGTTTGACATTGTTGCATATGTATACGCTGATGTTGACCGCGGTGCCTGGGTTGCTGCATCATCAAATGTGAGGCTCCATGTGGATCACCTAGCCCAACAGCATAAATTACCAAAGGATTTCTCTCTAGAAACTTTCAATTCCAGTTTGGTTGAATTTGCTGACACTATGGGTATAAGTATGAAGAGAATGCAGTAG 1473 0.4379 MAAHTLALIIENPSNHHEFLLVKQPRPPKFHDQEYDSFVDSDLWDLPSALLNPLQPGSEPPVAVEVAGSHSEELNLGQFDIRSALNEVFLQIGFGEVEGGEWKFYKYIKEAAFGPGLPHNTVFIAGKLVTEDVALLDSHKWMSVQSCLNLLLEVKPQDDRVGPLVVVGHINNSFDCAKWKVPPAINYQEYPPGVILIPMESRTAKPFSTTNLVVFAPANASNDCEDNNFIACGDALIVDPGCLSRFHGELEKVVTTLPRRLVVFVTHHHHDHVDGLSVIQKCNPDATLLAHENTMRRISKDDWSLGYTSVTGDDEINIGGQRLRAIFAPGHTDGHLALLHKNTHSLIVGDHCVGQGSAVLDITSGGNMTEYFQTTYEFLKLSPHVLISMHGRINLWPKQMLCGYLKNRRNREANILKAIEGGAKTLFDIVAYVYADVDRGAWVAASSNVRLHVDHLAQQHKLPKDFSLETFNSSLVEFADTMGISMKRMQ* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4079 490 Gene3D - 228 396 IPR036866 -
Amo19g4079 490 Gene3D - 398 470 IPR036388 -
Amo19g4079 490 SUPERFAMILY Metallo-hydrolase/oxidoreductase 232 462 IPR036866 -
Amo19g4079 490 PANTHER ENDORIBONUCLEASE LACTB2 98 476 - -
Amo19g4079 490 Pfam Beta-lactamase associated winged helix domain 425 461 IPR041516 -
Amo19g4079 490 SMART Lactamase_B_5a 226 390 IPR001279 -
Amo19g4079 490 PANTHER ENDORIBONUCLEASE LACTB2 98 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4079 Amo-Chr19 157185635 157193690 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4079 19 157185635 157193690 Amo19g4079 19 157185635 157193690 ECH