Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4074 ATGTCACTTCTTAATCAGCTCTTTAACAGAGGTGTTTTCGCCACTCGCTGTAAAACATGTCTTAKCCTGTCGATCTCGCGCATTAAGKTGCTGCAAAACAAGAGAGATGCGCAACTGAAGCAAATGCGCAAGGAGATTTCCCAATTCTTGCAGGCTGGCCAAGAGGCAATTGCTAGAATTCGGGTGGAGCATATCATTCGAGAACAAAATATATGGGAGGCATATGAAATTTTAGAGTTATTCTGTGAATTTGTTCTTGCTCGTGTACCTATAATTGAGAGCCAGAAGGAGTGCCCYCCAGAATTGCGAGAAGCCATTGCTAGTTTAATTTTTGCTGCCCCTAGATGTTCAGATGTGCCAGACTTATTGCACYTCAAGAACTTATTCACCTCTAAATATGGAAAGGAGTTTGTATCTGCAGTATCCGAACTTCGTCCTGATTCTGGCGTGAACCGCATGATAATTGAGAAGCTCTCTGTTAGTGCTCCACCTGGAGAAGTAAAGCTCAAGGTCTTGAGGGATATTGCTAAAGAATATAACATAACATGGGATTCTTCTAAAACTGAGGCAGAATTTAGGAAAAATCATGAAGATCTCCTGGGTGGAGCAAAACATGTTGATATTGGATCTGCCGTTTCTCATACTCCTAGGAAAAAAGGAACTAGTAATTCATCATCTTCTAGTACAGAATATTCCATCAAGTCCATGCGTAACAAGCAAGAACAAAAACACCTTGAAACTCCTAGGCCTTCAACCAATGATTATTGGATGAATACGAATGAAATTGAACAGTCCCTCAACTATGCTAAGGTTCCCACTACTGATGCCAAAAGAGAGACAAGGCCGCAGTCCTCTGATGTATTGGAGAAGGCTCAAGCGGCCATTGCTTATGCAGAGCGTGCATCCGCTGCTGCTCGTGCTGCAGCTGCACTAGTTAACAATGATTTTGGCTCACTAAAGCTGGATGGTAAATCTTCATAG 981 0.423 MSLLNQLFNRGVFATRCKTCLXLSISRIKXLQNKRDAQLKQMRKEISQFLQAGQEAIARIRVEHIIREQNIWEAYEILELFCEFVLARVPIIESQKECPPELREAIASLIFAAPRCSDVPDLLHXKNLFTSKYGKEFVSAVSELRPDSGVNRMIIEKLSVSAPPGEVKLKVLRDIAKEYNITWDSSKTEAEFRKNHEDLLGGAKHVDIGSAVSHTPRKKGTSNSSSSSTEYSIKSMRNKQEQKHLETPRPSTNDYWMNTNEIEQSLNYAKVPTTDAKRETRPQSSDVLEKAQAAIAYAERASAAARAAAALVNNDFGSLKLDGKSS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4074 326 Coils Coil 28 29 - -
Amo19g4074 326 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Amo19g4074 326 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 15 312 - -
Amo19g4074 326 Coils Coil 31 48 - -
Amo19g4074 326 PANTHER IST1 FAMILY MEMBER 15 312 IPR005061 GO:0015031
Amo19g4074 326 Gene3D - 5 192 IPR042277 -
Amo19g4074 326 MobiDBLite consensus disorder prediction 205 256 - -
Amo19g4074 326 MobiDBLite consensus disorder prediction 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4074 Amo-Chr19 157132233 157134667 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4074 19 157132233 157134667 Amo19g4074 19 157132233 157134667 ECH