Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4072 ATGGCAGTTTCAGCTTCTCTAATTCCGGTATCATCCACCACCACGACTTCGCTCGCATTCGGCACCAGAAAGCCACCCGCATTTCCGTCTATTGCTTGTCCATTCAAGGGATCCCTCAAGAAGTTGAACTCGACACCATGCGGCTACACGGCAACGCTCAGGGTGCAGCTCAGAAGACCCCTCTCGGTGGTGAACAAGGCAGCTTCTGCCCCTGCCCCTGCGGCGGGGGCTTCGAGCGTGCGGTTCAGGCTTGACAACCTGGGCCCGCAACCGGGTTCGAGGAAGAAGGCGAAGAGAAAGGGAAGAGGCATATCGGCGGGGCAAGGCGCAAGCTGTGGTTTTGGGATGAGGGGTCAGAAGTCACGGTCTGGCCCCGGCGTCAGGAAGGGTTTCGAGGGTGGTCAGATGCCCCTTTACCGTCGAATCCCCAAACTTCGAGGAATTGCTGGCGGTATGCGTGCTGGGCTACCAAAATATGTCCATGTAAATCTGAGGGACATAGAGGATGCTAGATTTAAGGATGGTGAACAGGTGTCTCTTGAAACTCTAAAGGAGAAGGGTGTGATTAATCCATCAGGAAGAGAAAGGAAACTTCCTTTGAAGATTTTAGGTGAAGGAGAGCTTAGTAAGAAGTTGACATTTAAAGCCCGTGCTTTTTCAACATCCGCAAAGGAGAAACTAGAGAGTGCTGGTTGTTCCCTCACTGTGCTTCCTGGCCGTAAGAAATGGGTTAAGCCATCTGTTGCTAAAAACCTTGCGCGTGCTGAAGAATACTTCGCCAAGAAGCGAGCTGCTGCAGCTGCATCTGAACCAGCTTCCGCATGA 825 0.5273 MAVSASLIPVSSTTTTSLAFGTRKPPAFPSIACPFKGSLKKLNSTPCGYTATLRVQLRRPLSVVNKAASAPAPAAGASSVRFRLDNLGPQPGSRKKAKRKGRGISAGQGASCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVHVNLRDIEDARFKDGEQVSLETLKEKGVINPSGRERKLPLKILGEGELSKKLTFKARAFSTSAKEKLESAGCSLTVLPGRKKWVKPSVAKNLARAEEYFAKKRAAAAASEPASA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4072 274 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 108 234 IPR021131 -
Amo19g4072 274 Gene3D - 159 236 - -
Amo19g4072 274 SUPERFAMILY Ribosomal proteins L15p and L18e 85 236 IPR036227 -
Amo19g4072 274 PANTHER 50S RIBOSOMAL PROTEIN L15 22 272 IPR005749 GO:0003735|GO:0006412|GO:0015934
Amo19g4072 274 MobiDBLite consensus disorder prediction 81 132 - -
Amo19g4072 274 ProSitePatterns Ribosomal protein L15 signature. 201 231 IPR001196 GO:0003735|GO:0005840|GO:0006412
Amo19g4072 274 Hamap 50S ribosomal protein L15 [rplO]. 84 237 IPR030878 GO:0003735|GO:0006412|GO:0015934
Amo19g4072 274 TIGRFAM rplO_bact: ribosomal protein uL15 84 234 IPR005749 GO:0003735|GO:0006412|GO:0015934
Amo19g4072 274 PANTHER BNAA06G33230D PROTEIN 22 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4072 Amo-Chr19 157080515 157084649 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4072 19 157080515 157084649 Amo19g4072 19 157080515 157084649 ECH