Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4006 GAAACTCAACCAACCCACCCCATTGACCTTAATTCTCCCCAAAACTCTGTCGCCTTGGTCTTCACGTTTTCCCACCCGTTTACCAAATTCCCTCTATTTCTTCTAACACACTGCAATGTTTCTCCATTGCCCCTTATGATGGATTCTCCCTCTTTCTCTTCCTCCTCCTCTGAATTTGCTTCCATAGCCACCGCTGATCAGAATGCCGCCAGAAGTAGGAGAAGCGGTGATGGCAGTGAAGCTGCCAGTTTAGAACAATCACGGAGGCGATGGCATGATGTTTTCTGGTTTGGAGTATTTGTGGTTCATTTGGTTGCCCTTGGTTTCCTTCTGGGGGTTCTTGGCCTCAATAGGTTCAAGGAAGAGAATAGACTTAACATTGACAAGTTTACCTCCCGGTTTTCGGAGAATGAAGCTGGGTTGACCGAGACTTATTGGCCGCTTTATGCTGCTGCTGGTGGAGTTGGGACAGTTCTTGGATGGAGTTGGTTGTTGTTGTTGGGCTCAAGGGCCACTCAGATGATGAAGGTGTCCGTTCACATCCTCACCACTTATCTTGCTGTGGTTAGTGTTCTGTGTTTCTGGGCAGGCCAGATTTTTTGGGGAATCGCCTTTGCTATTGGAGCTGCCCTGCAGTTCTTGTATGTCTTAGCAGTCATAGACAGACTTCCATTCACAATGTTGGTTCTGCAAAAAGCTGTGCAGATGGTATGGAATCTTCCTGAGGTTATGAGAGTGGCATACTTATTTATGGTGGTTGTGCTTTTATGGATGGCCTTATGGTCATTTGGAGCAGCTGGTGTTGTGGCTTCAAGTATCGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTTTTCTCTGTAAGCTTATTTTGGACGGGTGCGGTACTCTGTAATACTGTACATGTTATAGTGTCTGGGATGGTATTTCTTGTTCTTTTCCATGGTGGTAGAGAGGCGGCATCAATTCCCGATGATTCCTTAATGAAATCTCTACAGTATGCTTTAACAACATCTTTTGGCAGTATCTGTTATGGCTCACTATTTACTGCTGCTATTAGGACCTTGAGGTGGAAGATTCGTGGGTTTCGTTCAAAGATTGGCAACAATGAGTGTCTGCTGTGCTGTGTCGATTTCCTTTTCCATCTTGTGGAGACTCTTGTCCGATTTTTCAACAAGTATGCTTATGTTCAGATTGCTGTGCATGGTAAAAGCTTTAACCGTTCGGCTAGAGATGCATGGGAGCTGTTCCAATCAACTGGGGTCGAAGCACTTGTGGCCTATGATTGCTCAGGTGCTGTCCTGCTAATGGGCACCGTTTTCGGCGGGCTCATAACCGGAACTTGCTCTGGTGTTTGGGCTTGGTTCAAATGGCAGGACCGAGTTATGATGATTGGGTCCACGTCCATGCTAATGGGAATGGTATTGGTTGGATTGGCAATGGTTGTGGTGGAAAGTGCTGTTACATCGATATATATATGCTATGCAGAAGACCCCTTATTGATACAAAGATGGGACACTGAATTTTTCAACCAGTTATCGGAGACACTGCATCAGAGGCTTCAACATAGAAGTGCTCGAGCTAGGGAAGTTTTAACCCGCTATCGTCTCGATGGAAATACTTCCATTTGA 1629 0.4598 ETQPTHPIDLNSPQNSVALVFTFSHPFTKFPLFLLTHCNVSPLPLMMDSPSFSSSSSEFASIATADQNAARSRRSGDGSEAASLEQSRRRWHDVFWFGVFVVHLVALGFLLGVLGLNRFKEENRLNIDKFTSRFSENEAGLTETYWPLYAAAGGVGTVLGWSWLLLLGSRATQMMKVSVHILTTYLAVVSVLCFWAGQIFWGIAFAIGAALQFLYVLAVIDRLPFTMLVLQKAVQMVWNLPEVMRVAYLFMVVVLLWMALWSFGAAGVVASSIGDGGRWWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLFHGGREAASIPDDSLMKSLQYALTTSFGSICYGSLFTAAIRTLRWKIRGFRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVHGKSFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTVFGGLITGTCSGVWAWFKWQDRVMMIGSTSMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDTEFFNQLSETLHQRLQHRSARAREVLTRYRLDGNTSI* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4006 542 Pfam Plasma-membrane choline transporter 203 498 IPR007603 GO:0022857|GO:0055085
Amo19g4006 542 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 73 533 IPR007603 GO:0022857|GO:0055085
Amo19g4006 542 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 73 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4006 Amo-Chr19 156075417 156078557 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4006 19 156075417 156078557 Amo19g4006 19 156075417 156078557 ECH