Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4003 ATGGAGAGTGCGATACGTGGGAGATTCGCTCTTTCTCCCAACGGTATCTCCAACCCTAAACCAGGAGATAGATATTCACTTTGTAGAGGACCATGCTCCAATCTTTGCATCCCCACAGCTGCAATAACTACAAGACCGGGCAAAGGTGCAGGGCTGCTGGAAAAGCCAGTAATTGAAAAAGTTACCCCTGGCCGTGAATCTGAATTTGATTTGAGGAAATCGCGAAAATCAGTGCCACCATATCGCGTAATATTGCACAATGACAACTTCAATAAACGGGAATATGTGGTCCAAGTACTGATGAAGGTTATTCCTGGGATGACCATTGACAATGCTGTTAATATCATGCAAGAAGCGCACTACAACGGGTTGTCAGTGGTTATCATCTGTTCCCAAGCTGATGCTGAAGTATACTGCATGCAACTGAGAGGAAATGGGCTACTAAGTTCAATTGAGCCTGCAGGCGGAGGGTGCTGA 477 0.4591 MESAIRGRFALSPNGISNPKPGDRYSLCRGPCSNLCIPTAAITTRPGKGAGLLEKPVIEKVTPGRESEFDLRKSRKSVPPYRVILHNDNFNKREYVVQVLMKVIPGMTIDNAVNIMQEAHYNGLSVVIICSQADAEVYCMQLRGNGLLSSIEPAGGGC* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4003 158 Pfam ATP-dependent Clp protease adaptor protein ClpS 78 144 IPR003769 GO:0030163
Amo19g4003 158 PANTHER BNAA07G24510D PROTEIN 1 158 - -
Amo19g4003 158 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 158 IPR022935 GO:0006508
Amo19g4003 158 Gene3D - 75 153 IPR014719 -
Amo19g4003 158 SUPERFAMILY ClpS-like 75 152 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4003 Amo-Chr19 155980774 155982652 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4003 19 155980774 155982652 Amo19g4003 19 155980774 155982652 ECH