Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g3990 ATGGCCAGCGGAAGCGGCGATGCCACTTCTGCTTCTGCGTCTTCTTCCTTCTCCAGTTTTAGCGCGTATCTACACGCGCTCTCTCACACTCCTTCTCGCCTTGCSACCCGTGCCGTCTCAGTKTCCACCTCCTACGACGAGATGACCCGCCTCCGCGCCCGATCCGGCTCCCACATGCGCCGCACTCTCCGCTGGTACGACCTCGTCGCCCTCGGCGTCGGCGGCATGGTRGGCGCCGGCGTCTTCGTCACCACCGGACGCGCCGCTCACCTCTACGCTGGTCCCGCCGTTGTCCTCTCCTACGCAATTGCAGGCCTCTGCGCTCTTCTCTCCGCCTTCTGCTACACAGAGTTCGCCGTCGACATGCCAGTGGCKGGCGGCGCCTTCAGCTACCTCCGCGTGACKTTCGGRGAATTCGCGGCGTTCCTGACTGGAGCGAACCTCGTGATGGACTACGTGATGTCGAATGCGGCCGTRGCMAGAGGTTTCACGTCTTACCTCGGCACCGCAATRGGCATCTCCTCCAGCAAGTGGAGGCTGACGGTGCCGTATCTCCCTAAAGGCTTCAACCAGATAGACCTGGTGGCTGTCGCCGTCGTTCTCCTCATGACCCTCGTCATCTGCTACAGGTTCCTTCAATTCCTTCATTCCTTCATTCATTCATATTCACACCTCATTCACTCAGTGGTGAATATAATATTGACGGCGTTACACATTGTGTTCATAGCGTTCGTGATAGTGATGGGATTTTGGAGAGGAAGCTGGAAGAATTTCACGGAGCCGAGTGAGCCGGAGAAGTATCCGTCAGGATTCTTTCCGCACGGTGCTTCGGGTGTGTTCGTGGGGGCTTCAGCGGTTTACATGAGTTACATTGGATACGACGCCGTATCGACGATGGCTGAAGAAGTGAAGGAACCAGTGAAGGACATACCGATCGGTGTGTCAGGGTCGGTGGCTATTGTCACTGTTCTCTATTGCCTCATGGCAGCATCCATGTCCAAACTTCTCCCATACGACTTGATCGATGCGGAAGCGCCGTTTTCGGCGGCGTTCAGTGGGAAATGGGTGTCGCGGGTGATAGGAGTGGGGGCCAGCTTCGGGATCTTGACGTCGCTGTTAGTTGCAATGCTTGGTCAGGCCCGTTACATGTGCGTCATCGGACGGTCTGGCGTGGTCCCCACTTGGTTCGCCAGGGTCCACCCTAAAACTAACACCCCTGTCAACGCCTCCGCTTTTCTTGATGCTAATGAAGGAGTGTGCATTTTGACTTATCTAAACTGCAATTATACGCATTATAGTAATTCGCATATTATGTTATATTCTTCAGGGATATTCACAGCGGCAATAGCAGTTTTCACAGAGCTAGACGTGCTGCTGAACCTGGTTTCCATAGGCACACTGTTTGTGTTCTACATGGTGGCAAACGCAGTAATCTACAGYCGATACGTGGCAATTGGAACAACGAATCCATGGCCTACAATGTCCTTCCTCTGCTCATTTTCCATGACAAGRATAATCTTCACTCTTATATGGAAGTTCGTACCAACAGGGAATGCCAAAGCAGGGTTGCTAAGTGGGTGCGCTGTGATTGCCGTTGGAATTCTGCAAGTGTTTCAGTGCATGGTCCCTCAAGCAAGGAAGCCAGAATTCTGGGGTGTCCCACTCATGCCATGGATTCCATCCTTCTCAATCTTCCTCAACGTTTTCTTGCTTGGTTCTCTTGATGGCCCATCCTATCTTCGCTTCGCCTTCTTTTCTGCTCTTGCTGTACTTTTCTATGTTTTTTACAGTGTCCATGCCAGCTTTGATGCTCAGGCCCATGGATCCCTTCTTCAAAAGATCACTTATGATCATCCTCATGTGGAACCCATGGAATTTCAGGATCTCACTTTCAAAGTCTAG 1902 0.5237 MASGSGDATSASASSSFSSFSAYLHALSHTPSRLATRAVSVSTSYDEMTRLRARSGSHMRRTLRWYDLVALGVGGMVGAGVFVTTGRAAHLYAGPAVVLSYAIAGLCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFLTGANLVMDYVMSNAAVARGFTSYLGTAXGISSSKWRLTVPYLPKGFNQIDLVAVAVVLLMTLVICYRFLQFLHSFIHSYSHLIHSVVNIILTALHIVFIAFVIVMGFWRGSWKNFTEPSEPEKYPSGFFPHGASGVFVGASAVYMSYIGYDAVSTMAEEVKEPVKDIPIGVSGSVAIVTVLYCLMAASMSKLLPYDLIDAEAPFSAAFSGKWVSRVIGVGASFGILTSLLVAMLGQARYMCVIGRSGVVPTWFARVHPKTNTPVNASAFLDANEGVCILTYLNCNYTHYSNSHIMLYSSGIFTAAIAVFTELDVLLNLVSIGTLFVFYMVANAVIYSRYVAIGTTNPWPTMSFLCSFSMTRIIFTLIWKFVPTGNAKAGLLSGCAVIAVGILQVFQCMVPQARKPEFWGVPLMPWIPSFSIFLNVFLLGSLDGPSYLRFAFFSALAVLFYVFYSVHASFDAQAHGSLLQKITYDHPHVEPMEFQDLTFKV* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g3990 633 Pfam Amino acid permease 64 522 IPR002293 GO:0016020|GO:0022857|GO:0055085
Amo19g3990 633 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 13 417 - -
Amo19g3990 633 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 442 619 - -
Amo19g3990 633 PIRSF AA_transporter 539 620 - -
Amo19g3990 633 PIRSF AA_transporter 46 542 - -
Amo19g3990 633 Pfam C-terminus of AA_permease 551 601 IPR029485 -
Amo19g3990 633 PANTHER AMINO ACID/POLYAMINE TRANSPORTER I, CATIONIC AMINO ACID TRANSPORTER-RELATED 13 417 - -
Amo19g3990 633 Gene3D Amino acid/polyamine transporter I 58 544 - -
Amo19g3990 633 PANTHER AMINO ACID/POLYAMINE TRANSPORTER I, CATIONIC AMINO ACID TRANSPORTER-RELATED 442 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g3990 Amo-Chr19 155807542 155810628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g3990 150 625 Organic Solute Cotransporters AT3G10600 64.375 0.0 599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3990 19 155807542 155810628 Amo19g3990 19 155807542 155810628 ECH