Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0116 ATGGAAATACTTGATGATGCAATTGACAACATGGGGTTGAGTAACAAAAAAGTTTCAAAGCTTCTACTTGTGCTTTTCATAGTCATCCCTTTGGTTTTCATCACTACTACCTCAATGTGCAAAATCTCAAACAATTTTCTTCCTTTTGAGGGGTTTCAAAAAGTATTATTAGAAGGAAGATATCAGAATGATAATGATAATAATAATAATCATAGCATGGAATTGGAAGGAAGAGGAATAGTCCAAAATATGACACATGAGAACTCAGGAGGAGGAGAAGAAGAAAAGAATAATACTATTGAGGTATCTCAAGGGAAAGTTCAGAATAATTGCACTGCTTCACAAGGAACAGTAACAGATGGAGGGCCAAAAAATAACACACAAAAACTTTCAACAAATGATTCAAAAAATTCAACCACACATGACAAATTTCTTGATGGACTTTTACCTTCTGGATTTGATGAATCAACATGCCTAAGCAGGTATCAATCCCATTTATACCGCAAACCTTCTAATCACAAGCCATCTCCATATTTGATATCTAAACTCAGAAACTATGAAGAATTTCACAAAAGATGTGGACCAAACTCTAGAGCTTATAAAATAGCCATGCAAAAAATAACAACCCCAAGTTCTAAAACACATCATCATTATCATCATCACAATGATAATGTTGATGCTGCAAAGTGCAAATATCTTGTATGGACACCTGTAAATGGACTGGGAAATCGAATGATTAGCATCGCCGCCGCCTTCCTCTTCGCCGTCCTCACAGACAGAGTTCTGTTAGTAAGATTTGAAGCAGACATGCATGGCCTATTCTGTGAACCATTTCATGGGTCAACTTGGATTTTGCCTATGAATTCACCCTTTTGGAACCATGAGAATGTTGAGACATATCAAAGTATAGTGTTAGCTAAGGTGGACAAAGCTAGAAACTTGACATTGGATCAATTGTTATTGCCTTCTGTTCTGTTTATTAATCTACAACATACAAAAGAAGATCCTGAAATGTTTTTTCATTGTGATCATAATCAAGAAGCTCTCAAGAAAGTTAATGTCTTGATTGTTCAATCAGATCAGTACTTTGTGCCTTCTCTGTTCATGACTCCATCTTTTAGTCATGATATGAACAAGATGTTCCCGGAAAAGGATGCCGTTTTCCACCACGTCGGCCGGTACCTTTTCCACCCTTCGAATGAAGCGTGGGGACAAATTAGTAAATTCTATGATACATACTTGGCGAAAGCAGACGAGAGGATTGGACTGCAGATAAGAGTGTTTAGACCCACTTTCACTCCTCAACAAGCAGTTATGGACTTGCTTTTAAGCTGTGCTACAAGTAATAAGATACTTCCAGAAGTCGATACGCAAAATCCGGCCGGCACGACGGCTTCAAAAGTGGGGAGAAACAACCATACTCTAAAGGCTGTTGTTGTGGCATCTTTGTATCCAGAATATGGTGAAAATTTGAGAAGTATGTACCTTAAAGGACCAACTATTACCGGAGAAGTAATAAGAGTTTATCAACCAAGTCATGAAGAAAAGCAAAAGTTTAAWGATAATGTGCATAACATAAAGGCATTGGTGGATATGTATCTACTAAGTTTATGTGATGTGTTGGTGACTTCTTCATTGTCTACTTTTGGGTATGTGGCTCAAGGTTTTGGGGGTTTGAAGCCTTGGTTACTTTATGGGCTGGTAAGTAATGAAACACATTTTCCACCTTGTCTTAGGGACTTGTCACCTGAGCCTTGTTACCATTTTCCACCTCAACATCAGTGTAATGGGAACTCCAAAGAACATTTTGCTGCTTCTTTCCCACATATGTTTGAATGCAAGGATTATTACCGTGGAGTGAAGTTGGGTGATGGTGTAGTTCATTAA 1887 0.3789 MEILDDAIDNMGLSNKKVSKLLLVLFIVIPLVFITTTSMCKISNNFLPFEGFQKVLLEGRYQNDNDNNNNHSMELEGRGIVQNMTHENSGGGEEEKNNTIEVSQGKVQNNCTASQGTVTDGGPKNNTQKLSTNDSKNSTTHDKFLDGLLPSGFDESTCLSRYQSHLYRKPSNHKPSPYLISKLRNYEEFHKRCGPNSRAYKIAMQKITTPSSKTHHHYHHHNDNVDAAKCKYLVWTPVNGLGNRMISIAAAFLFAVLTDRVLLVRFEADMHGLFCEPFHGSTWILPMNSPFWNHENVETYQSIVLAKVDKARNLTLDQLLLPSVLFINLQHTKEDPEMFFHCDHNQEALKKVNVLIVQSDQYFVPSLFMTPSFSHDMNKMFPEKDAVFHHVGRYLFHPSNEAWGQISKFYDTYLAKADERIGLQIRVFRPTFTPQQAVMDLLLSCATSNKILPEVDTQNPAGTTASKVGRNNHTLKAVVVASLYPEYGENLRSMYLKGPTITGEVIRVYQPSHEEKQKFXDNVHNIKALVDMYLLSLCDVLVTSSLSTFGYVAQGFGGLKPWLLYGLVSNETHFPPCLRDLSPEPCYHFPPQHQCNGNSKEHFAASFPHMFECKDYYRGVKLGDGVVH* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0116 628 Pfam Xyloglucan fucosyltransferase 132 595 IPR004938 GO:0008107|GO:0016020|GO:0042546
Amo19g0116 628 Gene3D - 227 279 - -
Amo19g0116 628 MobiDBLite consensus disorder prediction 83 143 - -
Amo19g0116 628 PANTHER FUCOSYLTRANSFERASE 2-RELATED 16 622 IPR004938 GO:0008107|GO:0016020|GO:0042546
Amo19g0116 628 Gene3D - 405 560 - -
Amo19g0116 628 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 16 622 - -
Amo19g0116 628 MobiDBLite consensus disorder prediction 95 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0116 Amo-Chr19 1107166 1111136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0116 131 625 Xyloglucan Fucosyltransferase1 AT1G14100 45.219 9.74e-153 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0116 K13681 - gmx:100818288 665.996