Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2549 ATGTCATCCCTTAGATTCTGCTTCACTTCTCTTACAATATGCTCTCCCCGCAATCTCTTGGCCATTCCCCCTCAAAGGATCAACACCTTTTGTTGCTGCGCGAAACCCTCTAGGCAAAATGACTTCATTTCTGAGGCCAATACCCTTCAATCTTCTCCTCCTTCTGCTTCGCCAAAACATTCTCCTCTTTTTGGAATGGATGATACTTTGGTGAGCTATCTGTGTGGCAAGAAGAAGGCAACAGACCTTGCTCACATGGTATGGAAACATGTTGTCCAGAAGGGAGACACAGTCCTAGATGCCACTTGTGGCAACGGCTTTGACACCTTGGCAATGCTCAACTTGGTTGCTGATGATTCTCGAAAAGGTTATGTATATGCATTGGATATTCAGAAAGATGCTTTAGATAATACTTCTATCTTGCTTGAAGAATCACTAAATCCGGATGAGAGACAACTTGTCAAGCTAGTCAACATCTGTCATAGTAAAATGGAAGAAGTGGTTCCAAGGAATGCCTTAGTGAGGCTTGTTGGCTTCAACTTGGGTTATCTTCCTGGTGGCAAAAAAGAAATAATAACAAGGCCAGAAACAACGTTTCTGGCACTGGAAGCTGCAGAGAGAATTCTAATGCCAGGAGGGCTTATCAGTATTGTGGTCTATGTTGGGCACCCTGGTGGACGGGAGGAATTGGAGGCTGTTGAAACTTTTGCTGCGAGAATGCCTGTTGAGAATTGGATCTGCTGCAAGCTCCGAATGGTAAACCGACCGTGTGCTCCTGTACCAATTTTTTTATTCCGAAGATAA 804 0.4428 MSSLRFCFTSLTICSPRNLLAIPPQRINTFCCCAKPSRQNDFISEANTLQSSPPSASPKHSPLFGMDDTLVSYLCGKKKATDLAHMVWKHVVQKGDTVLDATCGNGFDTLAMLNLVADDSRKGYVYALDIQKDALDNTSILLEESLNPDERQLVKLVNICHSKMEEVVPRNALVRLVGFNLGYLPGGKKEIITRPETTFLALEAAERILMPGGLISIVVYVGHPGGREELEAVETFAARMPVENWICCKLRMVNRPCAPVPIFLFRR* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2549 267 Pfam Putative rRNA methylase 125 263 IPR010719 -
Amo18g2549 267 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 89 236 IPR029063 -
Amo18g2549 267 Gene3D Vaccinia Virus protein VP39 76 267 IPR029063 -
Amo18g2549 267 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 29 267 IPR010719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2549 Amo-Chr18 102088102 102093983 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2549 18 102088102 102093983 Amo18g2549 18 102088102 102093983 ECH
Amo18g2549 18 102088102 102093983 Amo07g2052 07 63245956 63251668 hybridization