Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2404 ATGCCCCTCTCTACTATGGCTTCTTCAATCCCTCATCATCAGTTCTATTCAAACTACACGTTCACTACCGATCTTGTTGATTTTCCTTATCATGCACCCAACAATAACAACAACAACGCTTCATCAATCATTATGGACAATTTCGCTATATGGGGTAGTGGCCAAGATTGCTTCTTCATTAACAACCACAACAACATCACCAACTCTTTGATTATTGATAATGAAGCACTTGATTGTGACACCATGAATTCTTCTTCTTGGGCAGTGCCAAGTTTCGCGGAGCAACTTGGCGGTGGTGGTGTTTCATCCGATATGGCTGTGCCGGCCATCTCTGACTGTAAAATGGGCTTCTATGGCGGCGCCACTGCCGGATTTCAAGACTTCAGCAGCGGCTACCGGCCTGGTCTTGGCAATTTTGGAGAAGAATGTTGTGGTTTCAAGGAGGATATTAAACAGCCTACTTATTCTAACGCTACAAGAGAGAATTGGGGAATTCAAGGAAATCAAATGCCAGCAATTGAAGAACCTAACATAAAGGTAGGAAGGTACTCAGAGGAAGAAAGGAAGGAAAGGATTCTCCGATATTTGAAGAAAAGAAATCAAAGAAACTTTAACAAAACCATCAAGTATGCATGCCGGAAAACGTTAGCCGATAGGCGAGTTCGAGTTCGGGGAAGGTTTGCAAGGAACAATGAGCTGTTATGTGAGGAAGACATGGCTACAAAGAAGAATGAGAATCATCATCATCATCATCATCATGATTTGAAAGAAGAGTTTTATGGTGGTGAATCAATCCAGTTCCAGTTAAAGAATGATGAGGAGGATTGGTTGCAAGAAGCCATGGCAAGTTTGGTCTATTTATCTCACTCTTCACCAGAAGACATGTAG 888 0.4223 MPLSTMASSIPHHQFYSNYTFTTDLVDFPYHAPNNNNNNASSIIMDNFAIWGSGQDCFFINNHNNITNSLIIDNEALDCDTMNSSSWAVPSFAEQLGGGGVSSDMAVPAISDCKMGFYGGATAGFQDFSSGYRPGLGNFGEECCGFKEDIKQPTYSNATRENWGIQGNQMPAIEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELLCEEDMATKKNENHHHHHHHDLKEEFYGGESIQFQLKNDEEDWLQEAMASLVYLSHSSPEDM* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2404 295 PANTHER ACTIVATOR OF SPOMIN::LUC2 6 290 - -
Amo18g2404 295 ProSiteProfiles CCT domain profile. 188 230 IPR010402 GO:0005515
Amo18g2404 295 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 6 290 - -
Amo18g2404 295 Pfam CCT motif 188 230 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2404 Amo-Chr18 83751607 83754161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2404 184 232 C2C2-CO-like Transcription Factor Family AT5G57660 51.020 5.40e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo18g2404 CCT 9.5e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2404 18 83751607 83754161 Amo18g2404 18 83751607 83754161 ECH