Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2186 ATGGAAGAAGAGGTTGTTTTGTTAGACGCATGGGCAAGCATGTTTGGTATGAGGGTGAGGATTGCACTGGCTGAAAAAGGTGTCAGTTATGAGTACAAAGAAGAGTATCTAATTAAGGGTAAAAGCCCTTTTCTTCTTCAGGTGAATCCAATACATAAGCAGGTTCCAGTTCTGATCCATAAGGGTAGACCGATTTGTGAATCTGCAATTATAGTTCAGTACATCGATGAGGTTTGGAATGACAAAAATCCAATCATGCCCTCTGACCCTTATGAGAAAGCTCAAGCTAGATTCTGGGTTGATTTCATTGACAAAAAGATCTATGAGACTTGGAGAAAAATGTGGCTCTCAGAAGGAGAAGAGCATGAGACATGGAAGAAGGAATTAATTTCTATTTTCAAGCAACTTGAGGAGATATTGGGAGACAAAGCATTTTATGGGGGTGACACTTTTGGGTTCCTTGATATTGGTCTAATTCCATTTTACAGTTGGTTTTATGCCTTTGAGACTTATGGCAACTTCAAAATGGAAGCAGAGTGTCCTAAATTAATAGCTTGGGCCAAAAGGTGTATGCAAAGAGACACTGTTTCCAAGACACTTCCTGATCAGAAGAAAGTGTATGATCATGTTCTGGCTATGAGAAAAGCACTTGAAAAATAA 660 0.3909 MEEEVVLLDAWASMFGMRVRIALAEKGVSYEYKEEYLIKGKSPFLLQVNPIHKQVPVLIHKGRPICESAIIVQYIDEVWNDKNPIMPSDPYEKAQARFWVDFIDKKIYETWRKMWLSEGEEHETWKKELISIFKQLEEILGDKAFYGGDTFGFLDIGLIPFYSWFYAFETYGNFKMEAECPKLIAWAKRCMQRDTVSKTLPDQKKVYDHVLAMRKALEK* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2186 219 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Amo18g2186 219 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Amo18g2186 219 Gene3D Glutaredoxin 1 88 - -
Amo18g2186 219 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 213 - -
Amo18g2186 219 Gene3D - 89 218 - -
Amo18g2186 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Amo18g2186 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Amo18g2186 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Amo18g2186 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Amo18g2186 219 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Amo18g2186 219 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Amo18g2186 219 Pfam Glutathione S-transferase, C-terminal domain 125 189 - -
Amo18g2186 219 CDD GST_N_Tau 5 79 - -
Amo18g2186 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2186 Amo-Chr18 63402617 63404306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2186 1 215 Glutathione S-transferase Gene Family AT1G78380 61.860 8.46e-100 287
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2186 18 63402617 63404306 Amo18g2186 18 63402617 63404306 ECH
Amo18g2186 18 63402617 63404306 Amo07g2120 07 65039085 65041089 hybridization