Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2170 ATGGCAGAAAATGATGAAGTAATAATGCTGGATTTCTGGCTAAGCCCATATGCGAGGAGGGTCCAAATAGCACTAGAGGAAAAGGGCATCAAGTATGAGATCAAAGAAGAGGACTTGCCTAATAATAAGAGCACCTTACTCCTGCAAATGAATCCTGTTTATAAGAAAGTTCCAGTTCTTATTCATAATGGAAAACCCATTTGTGAGTCACTCGTTGTTCTTGAGTACATTGATGAGGTTTGGAATCATAAGTCTCCTTCGTTGCTGCCTTCTGATCCTTATCACAGAGCTCAAGCTAGATTCTGGGCTGATTATGTTGACAAGAAGATATACGACAATGCTATGAAGTTTTTCAAAACAGAAGGAGAAGAGAAAGAAGATGGAAAGAAAGGGTTGATCGAGGGCCTGAAAGTAATGGAAGAACAAGTTGGAGGAGACAGGACATATTTTGGTGGAGACAACATTGGACTTGTAGATGTGATACTTGTCCCATTGTTCAGTTGGTTCTACGTCTACAAATTCACTAACAACTTGAATTTTGTGAGCCAAGAAAGCTTCCCTAACCTCTTTGCTTGGGCCAAGAAGTGCACTGAGAGAGACTGTGTGTCCAAGTGTACTCCTAAGGAACAAAAGGTCTTTGAGCATTTTCAGCAGAGGAATCTCTTGAATTCTGATCAGTGA 681 0.4068 MAENDEVIMLDFWLSPYARRVQIALEEKGIKYEIKEEDLPNNKSTLLLQMNPVYKKVPVLIHNGKPICESLVVLEYIDEVWNHKSPSLLPSDPYHRAQARFWADYVDKKIYDNAMKFFKTEGEEKEDGKKGLIEGLKVMEEQVGGDRTYFGGDNIGLVDVILVPLFSWFYVYKFTNNLNFVSQESFPNLFAWAKKCTERDCVSKCTPKEQKVFEHFQQRNLLNSDQ* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2170 226 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 6 218 - -
Amo18g2170 226 SFLD Glutathione Transferase (cytosolic) 3 219 IPR040079 -
Amo18g2170 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 221 IPR010987 -
Amo18g2170 226 CDD GST_N_Tau 7 81 - -
Amo18g2170 226 Pfam Glutathione S-transferase, C-terminal domain 122 200 IPR004046 -
Amo18g2170 226 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Amo18g2170 226 SUPERFAMILY Thioredoxin-like 7 110 IPR036249 -
Amo18g2170 226 CDD GST_C_Tau 93 219 IPR045074 GO:0004364|GO:0006749
Amo18g2170 226 Gene3D Glutaredoxin 3 88 - -
Amo18g2170 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 218 IPR045073 -
Amo18g2170 226 Gene3D - 89 224 - -
Amo18g2170 226 SFLD Main.3: Omega- and Tau-like 3 219 IPR045073 -
Amo18g2170 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 85 IPR004045 -
Amo18g2170 226 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2170 Amo-Chr18 62619771 62621051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2170 5 214 Glutathione S-transferase Gene Family AT1G78380 55.450 5.48e-80 237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2170 18 62619771 62621051 Amo18g2170 18 62619771 62621051 ECH