Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2167 ATGGCAGACGAGGTAGTTCTACTAAATTTCTGGTGCAGTCCTTTTGGTTTGAGGGTAAGGATTTCACTTGCCGAAAAGGGTATTAAGTATGAGTACAAAGAAGAGGACTTGATGGGGAACAAGAAAAGTCCTCTATTGCTAGAAATGAACCCGGTTCATAAGAAGGTTCCGGTTCTCATCCACAATGGAAAACCTATTTGTGAGTCTCTTATTATCGTTCAATATATTGATGAAGTGTGGAGTGATAGATCTCCTTTGTTGCCTTCTGATCCTTGTCAAAGAGCTCAGGCTAGATTTTGGGCTGACTATGTTGACAGAAAGATTGATGATTCTCAAAGCAAGTTACTTTTGGCGACAAAAGAGGAACAAGAAGCTGCCAAGAAGTCCTTCTTGGATGTCCTTAAATTGTTGGAGGAAGAACTTGGTCATAAGGCTTATTTTGGAGGAGACAAGTTTGATTTTTCAGACATAGCATTTGTTCCATACTACTGTTTTTTTAAAACCTATGAAATCCTTGGAAAATTCAAAATGGAAGAAGAGTGTCCCAGGATTATTGCTTGGGCCAAGAAGTGCATGGAGAAGGAAAGTGTATTTAAGTCTCTCCCTGACCCACAAAAAGTCTATGAGCTATTTGTGGAGGTAAGAAAGAAGTTTGGAGTGGAATAA 666 0.3934 MADEVVLLNFWCSPFGLRVRISLAEKGIKYEYKEEDLMGNKKSPLLLEMNPVHKKVPVLIHNGKPICESLIIVQYIDEVWSDRSPLLPSDPCQRAQARFWADYVDRKIDDSQSKLLLATKEEQEAAKKSFLDVLKLLEEELGHKAYFGGDKFDFSDIAFVPYYCFFKTYEILGKFKMEEECPRIIAWAKKCMEKESVFKSLPDPQKVYELFVEVRKKFGVE* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2167 221 Gene3D Glutaredoxin 1 89 - -
Amo18g2167 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 214 - -
Amo18g2167 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Amo18g2167 221 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Amo18g2167 221 CDD GST_C_Tau 91 211 IPR045074 GO:0004364|GO:0006749
Amo18g2167 221 CDD GST_N_Tau 5 80 - -
Amo18g2167 221 SFLD Glutathione Transferase (cytosolic) 2 219 IPR040079 -
Amo18g2167 221 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Amo18g2167 221 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Amo18g2167 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 214 IPR045073 -
Amo18g2167 221 Coils Coil 120 140 - -
Amo18g2167 221 Gene3D - 90 221 - -
Amo18g2167 221 SUPERFAMILY GST C-terminal domain-like 78 218 IPR036282 -
Amo18g2167 221 Pfam Glutathione S-transferase, C-terminal domain 120 194 IPR004046 -
Amo18g2167 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2167 Amo-Chr18 61722231 61723841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2167 1 218 Glutathione S-transferase Gene Family AT1G78380 60.550 1.77e-98 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2167 18 61722231 61723841 Amo18g2167 18 61722231 61723841 ECH
Amo18g2167 18 61722231 61723841 Amo07g2123 07 65105360 65107227 hybridization