Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2166 ATGGCAATTGATGAGGTGGTTCTGCTTGATTTTTGGTCGAGCCCTTTTGGTTTGAGGGCAAGGATTACACTTGCTGAAAAGGGTATTAAGTATGAGTACAAAGAAGAAGACCTGAGGAATAAGAGCAGTCTTCTCCTTGAGATGAACCCGGTTCACAAGAAAATACCGGTTCTTATCCACAATGGGAAATCTATTTGCGAGTCTCTAAATATTGTTCAATATATTGATGAAGTGTGGAATGATAGATCTCCTTTGTTGCCTTCTGATCCTTATCAAAGAGCTCAGGCTAGATTTTGGGCTGACTATGTTGACAAGAAGGTTTTCCCTGCTCAGAAGAAGTTAGCTTTTGCGACAAAAGAAGAAAAAGAATCTGCAGAGAAAGAATTCTTGGATGCCCTTAAATTGTTGGAGGAGCAATTGGGTGACAAGGATTATTTTGGAGGAGACAAGTTTGATTTTGTGGACATAGCATTTGCTCCATACTATAGTTTTTTCAAAATCTACGAGATTGTTGGGAACTTCAAAATGGAAGAAGAGTTCCCTAAGATTTGTGCTTGGGCGAAGAGGTGCATGCAAAAGGAAAGTGTTTCCATGTCTCTCCCTGACTCGCAAAAGGTCCTTGGGTTTTTTATGGAGATGAGGAAGAACTTCTTAGGAACAGAGTAG 666 0.4024 MAIDEVVLLDFWSSPFGLRARITLAEKGIKYEYKEEDLRNKSSLLLEMNPVHKKIPVLIHNGKSICESLNIVQYIDEVWNDRSPLLPSDPYQRAQARFWADYVDKKVFPAQKKLAFATKEEKESAEKEFLDALKLLEEQLGDKDYFGGDKFDFVDIAFAPYYSFFKIYEIVGNFKMEEEFPKICAWAKRCMQKESVSMSLPDSQKVLGFFMEMRKNFLGTE* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2166 221 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Amo18g2166 221 Gene3D Glutaredoxin 2 88 - -
Amo18g2166 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 5 214 - -
Amo18g2166 221 Coils Coil 119 139 - -
Amo18g2166 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 214 IPR045073 -
Amo18g2166 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 209 IPR010987 -
Amo18g2166 221 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Amo18g2166 221 CDD GST_N_Tau 6 79 - -
Amo18g2166 221 Pfam Glutathione S-transferase, C-terminal domain 116 193 IPR004046 -
Amo18g2166 221 Gene3D - 89 219 - -
Amo18g2166 221 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Amo18g2166 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Amo18g2166 221 Pfam Glutathione S-transferase, N-terminal domain 7 77 IPR004045 -
Amo18g2166 221 SFLD Glutathione Transferase (cytosolic) 4 218 IPR040079 -
Amo18g2166 221 SFLD Main.3: Omega- and Tau-like 4 218 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2166 Amo-Chr18 61618381 61620194 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2166 4 217 Glutathione S-transferase Gene Family AT1G78340 63.084 9.61e-102 292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2166 18 61618381 61620194 Amo18g2166 18 61618381 61620194 ECH
Amo18g2166 18 61618381 61620194 Amo07g2125 07 65163031 65165126 hybridization