Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2027 ATGATAAGAATATCTTCCCCAACTGCAATATGTTTCATCATAGTGGTTCCTTTGGTTCTTCTATGGGCATGGAAGCTTCTCAATTGGCTATGGCTGAGGCCAAAGAGATTGGAGAAGCTTCTAAGAGCTCAGGGACTTCAAGGCAACAAATACAGGGTTCTTGTCGGGGATTCAATGGAGATGATCAACATGATCAAGGAAGGTGCCAAATCTCAACAACACAACACTCTTTCCAATGATAAAGATGTAGCACCACATGTCTTCTCTTTTATCCATCACACTGTTCAAAAATTTGGTAAGAATTCTTTTGTCTGGGAAGGTACAACACCAAAGGTCATAATCACAAATCCTGATCAAATCAAAGAAGTCTTTAACAAGATCAATGATTTTGAGAAACCCACGTTGAACCCTCTTGTCAAGTTATTGGGCAACGGACTCGCAAACTATGACAGTGAGAAATGGCAAAAACATCGAAAGATTATCAACCCGGCTTTCCATTTTGAAAAATTAAAGGTAATGTCATCAACCATGTTCGAATCCTGTGATAAAATGGTTAGAAAATGGGATGCGATGCTAGCTTCCGAAGGAAAATGTGAAATCGACGTATGGCCATTTCTTCAAAATTTGACTTGCGATATTATTTCCAAGACAGCATTTGGAAGCAGCTATGAAGAAGGAAAYCGAATATTCGATCTTTTAAGAGAACAAGCTGGACTTATTATGAAATTACGAAATGTCTATATTCCCGGATGGTGGTTGATACCAACAGCTACACACAAGAGGATGAAAGAAATTGAAAAAGATATAAAAGCTTCGCTCGAGTTTATCATCAACAAAAGAGAGAAAGCAATGAAGGTAGGGAAAGTCATGAACAAAGACTTATTAGGCATACTTTTGGAATCAAATCATAGAGAAATACAAGAACATGGAAACAACAAAGCTGCTGGAATGACAAGCCAAGAAGTAATGGAGGAGTGCAATGCATTCTACCTTGCTGGCCAAGAAACCACCTCAGTTCTTCTAGTTTGGACAATGATACTATTGGGTAGGTATCCTGATTGGCAAGCACGTGCTAGAGAGGAAGTTTTGCAAGTTTTTGGCGATCAAAATCCGGATAGTGAAGGGTTAAGTCGCCTTAAAATTATGACAATGATTTTATACGAGGTTCTAAGGTTATACCCTCCAACTGTTTACTTCAATCGTGCTGTCCACAAAGATGTGAAACTTGGCAACCTTTCCCTTCCAGCAGGAACACAAGTTTCCTTGCCAATACTCTTGATTCATCATGATCGCGATATTTGGGGCGATGATGCAACAGAGTTCAAACCGGAAAGATTCTCTGAAGGAGTTGCAAAAGCAACAAAAGGCCAAGTTTCATTCTTTCCATTCGGATGGGGACCTAGAGTATGCATTGGGCAAAATTTTGCTTTAATGGAAGTAAAGATGGCTTTGTCATTGCTCTTACAACATTTCTCATTTCAGCTCTCCCCATCTTATGCACATGCTCCAACTACTGTACTCACTCTCAATCCAAAGCATGGGGCTCATGTTATCTTACATAAATTGTAG 1569 0.3945 MIRISSPTAICFIIVVPLVLLWAWKLLNWLWLRPKRLEKLLRAQGLQGNKYRVLVGDSMEMINMIKEGAKSQQHNTLSNDKDVAPHVFSFIHHTVQKFGKNSFVWEGTTPKVIITNPDQIKEVFNKINDFEKPTLNPLVKLLGNGLANYDSEKWQKHRKIINPAFHFEKLKVMSSTMFESCDKMVRKWDAMLASEGKCEIDVWPFLQNLTCDIISKTAFGSSYEEGNRIFDLLREQAGLIMKLRNVYIPGWWLIPTATHKRMKEIEKDIKASLEFIINKREKAMKVGKVMNKDLLGILLESNHREIQEHGNNKAAGMTSQEVMEECNAFYLAGQETTSVLLVWTMILLGRYPDWQARAREEVLQVFGDQNPDSEGLSRLKIMTMILYEVLRLYPPTVYFNRAVHKDVKLGNLSLPAGTQVSLPILLIHHDRDIWGDDATEFKPERFSEGVAKATKGQVSFFPFGWGPRVCIGQNFALMEVKMALSLLLQHFSFQLSPSYAHAPTTVLTLNPKHGAHVILHKL* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2027 522 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 Gene3D Cytochrome P450 75 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 SUPERFAMILY Cytochrome P450 85 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 8 518 - -
Amo18g2027 522 Pfam Cytochrome P450 86 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 518 - -
Amo18g2027 522 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g2027 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2027 Amo-Chr18 49432549 49437444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2027 6 522 Cytochrome P450 AT3G14690 53.179 0.0 592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g2027 18 49432549 49437444 Amo18g2027 18 49432549 49437444 ECH