Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g0059 ATGGGAGAAATCGAAGAAATTGCAATTGATGTTTGCTCAGATATAGATGTTGATGATATTAGATGCCATAATATAGCGGAGAAAGATGTCAGTGATGAAGAGATTGAAGCAGAAGAATTGGAGAGGAGGATGTGGAAGGATCGAATTAAACTCAAAAGACTCAAGGAAAAACAAAAGATTGCAGCACAGCAAGCCGCAGAGAAGCAAAAGCCGAGGCATACCACTGATCAAGCTCGGAGGAAGAAGATGTCCAGAGCACAAGATGGTATTCTTAAGTATATGCTGAAGCTTATGGAAGTCTGTAAAGCTCGTGGATTTGTGTATGGAATCATTCCTGAAAAGGGAAAACCGGTGAGTGGTTCCTCCGATAACATTAGAGCTTGGTGGAAAGAGAAGGTAAAGTTCGATAAGAATGGCCCTGCTGCCATAACAAAGTATGAAGCAGAGTGTCTTGCTATGAGTGAGGCAGATAACAATCGAAATGGGAACTCTCAGAGCACTCTCCAAGACCTGCAAGATGCAACACTTGGGTCACTCTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCATTGGAAAAGGGTATTCCCCCACCTTGGTGGCCAACCGGGAATGAAGATTGGTGGATCCAATCAAATTTACCCCATAATCAGAGTCCTCCTTATAAGAAGCCGCATGATTTGAAAAAGATGTGGAAAGTGGGAGTGCTAACTTCTGTTATAAAGCACATGTCACCTGATATTGCAAAAATAAGGAGGCATGTTCGCCAGTCAAAATGCTTGCAGGATAAGATGACAGCAAAGGAAAGTGCAATTTGGTTAGGGGTATTAAGTCGAGAAGAAGCTCTTATTAGGCAGTATAGTACTGATAATGGTACGTCTGGAATTACAGACGTGCCGCCTACTGTTCCTGCTGAAAATAAGCAACCAGCCGCTAGTAGTGATAGCAATTATGATGTTGATGGCGTTGATGATGGTGCTGGTTCTGTTTCTTCTAAAGAAGATAGGAGAAATCAAGTTACAGATGCTGAACCATCAGATAACTCGCGAAGGAATTCTATTCAAGAGAAAGATCAAGCTGAGAAACAACCCAGGAGAAAAAGACCTCGATTGAGGTCAAATACCACTAACAAATTACCACCACAACCTCATAATGAAACTTTACAAGTTGAGCCAGTAAGCACTTTGCCCAGTGAGAACCAGACAGAAGCTCAGGTGGTTGGGCAGATTCATGGAAATGAACAGGGTAATGATACAGATACTTCTATGAGACTAGTGGATAGAGGACCTGAGGTGCCAGCTCAACTACCGGCAACTGGATTTGATCATTTCTCTTATCTTCATTCGAACAACTTAGTTCCCTCGGAAAGCATGTATATGAGTGGGAGGCAATTGCACTATCCTGAGGTGCAAAACCCCGACATGCATCAAGGAACTAATTACAATATTTATAATCCAGTGGCAGGGTATGACCCTAGTCATGATGGACAGCAGTTGCAGCCCGGAAATGATGAACCAATGCAGCCAGATAATGCAGTCTCTATGCAACCAGAACATAATATGAAAGGAGATGAAATTACTGGAGATTTGCAATATTTTGGTAAAGATGCATTCCAAAATGAGCTTGACAGACCTATAGATCATTCTTTCTTTGGATCGCCAATCAGTAGCATGTCGTTAGATTTTGGAGGATTCAACAGTCCACCATTCCATTTGGATGATTTCTTGGGTGATGATGAAATGATCCAGTACTTTGGAGCATAG 1776 0.4206 MGEIEEIAIDVCSDIDVDDIRCHNIAEKDVSDEEIEAEELERRMWKDRIKLKRLKEKQKIAAQQAAEKQKPRHTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAITKYEAECLAMSEADNNRNGNSQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPWWPTGNEDWWIQSNLPHNQSPPYKKPHDLKKMWKVGVLTSVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQYSTDNGTSGITDVPPTVPAENKQPAASSDSNYDVDGVDDGAGSVSSKEDRRNQVTDAEPSDNSRRNSIQEKDQAEKQPRRKRPRLRSNTTNKLPPQPHNETLQVEPVSTLPSENQTEAQVVGQIHGNEQGNDTDTSMRLVDRGPEVPAQLPATGFDHFSYLHSNNLVPSESMYMSGRQLHYPEVQNPDMHQGTNYNIYNPVAGYDPSHDGQQLQPGNDEPMQPDNAVSMQPEHNMKGDEITGDLQYFGKDAFQNELDRPIDHSFFGSPISSMSLDFGGFNSPPFHLDDFLGDDEMIQYFGA* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g0059 591 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 8 589 IPR006957 GO:0005634
Amo18g0059 591 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 8 589 - -
Amo18g0059 591 Coils Coil 23 57 - -
Amo18g0059 591 MobiDBLite consensus disorder prediction 69 83 - -
Amo18g0059 591 MobiDBLite consensus disorder prediction 293 392 - -
Amo18g0059 591 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Amo18g0059 591 Gene3D - 73 148 IPR023278 GO:0003700|GO:0005634
Amo18g0059 591 MobiDBLite consensus disorder prediction 60 83 - -
Amo18g0059 591 MobiDBLite consensus disorder prediction 332 369 - -
Amo18g0059 591 Pfam Ethylene insensitive 3 38 285 IPR006957 GO:0005634
Amo18g0059 591 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Amo18g0059 591 MobiDBLite consensus disorder prediction 378 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g0059 Amo-Chr18 1307698 1311041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g0059 18 591 EIL Transcription Factor Family AT1G73730 52.226 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Amo18g0059 EIN3 2.3e-126 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0059 18 1307698 1311041 Amo18g0059 18 1307698 1311041 ECH