Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2857 ATGGCATCCACTTTTAATCGATGGGAGAAAGATCCTTTCTTTACCGCCGCCGAACAAGTTCAGGAGTCCGCAGACAGGATGGAATCTGCGTATAGGGCATGGATTCATGCAAAGAAAGATGCGTGCAGCCCTTGGAACTCTGATGAAATATGCCGGGATGTGCATACTGCTCTTGGCACTGCTAAATGGCAGTTAGATGAATTTGAAAAAGCGGTTACATCGAGTTATAACAATAGCTCAACTAAGGATGCAAGAAATAGGCACCAAGATTTCATTTCTGCCATTGTTGACAAGATTACAAAAGTTGAACATTCCTTAAATGAGTCCCTTCATCCAGGTAACAAGGCGCCTCTGCCTTGGGTGCGTCTAGATGAAGGAGAAAGAGATGAGCTCGCATTGTTCCTTTCCGGTGTGCCAGAGGCTGAAGGAAAATCTGTTGGTAGAGACCATGAGGATTCACAGTCAACATCTGGCTGGGGCTCCACACTAGAAGTGGAGGACAAATCACCTGGGCATCGCAGGGCGGCTAGTGCTGATGCCCATGTTAGTTCTTGGAAAATTGCTGTTTCTGATGAGCTTCAACAACGCAATACCCCCGATGGTTCTTCTGGTGCTATGCATAAGGTAGCCAGTCTCTCTGTGTTTGTTAGCTCCATGGAATCAGTCTCTAAGTTGAAGTGGGCCAAGAATGGTTATAAAAAGCTCAAAGCAGGAAATCATCATCAAGAAAGTGATAATGCACTGCTACCATCAGTGCAATTGAATGGGGGCTTGAATTCATGCTATGAAAGAAGTAAGAGTTACCTTGATAGCTGTGATGAATGTTATGATAAGCAACTATATGGATGGTATGGGGCTATTCAAAGACAGCTTCAAAGATCTCAATACCAAATGCAGTACAGTAGGCCTGTTCAGTTAACTGTGTGGATATCTATTCTCCTTTGCATGATAGTTTTAATTGCTTTTTGCACAATGTAG 978 0.4376 MASTFNRWEKDPFFTAAEQVQESADRMESAYRAWIHAKKDACSPWNSDEICRDVHTALGTAKWQLDEFEKAVTSSYNNSSTKDARNRHQDFISAIVDKITKVEHSLNESLHPGNKAPLPWVRLDEGERDELALFLSGVPEAEGKSVGRDHEDSQSTSGWGSTLEVEDKSPGHRRAASADAHVSSWKIAVSDELQQRNTPDGSSGAMHKVASLSVFVSSMESVSKLKWAKNGYKKLKAGNHHQESDNALLPSVQLNGGLNSCYERSKSYLDSCDECYDKQLYGWYGAIQRQLQRSQYQMQYSRPVQLTVWISILLCMIVLIAFCTM* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2857 325 PANTHER OS05G0443700 PROTEIN 1 324 - -
Amo17g2857 325 MobiDBLite consensus disorder prediction 142 179 - -
Amo17g2857 325 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Amo17g2857 325 Gene3D - 9 110 - -
Amo17g2857 325 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Amo17g2857 325 PANTHER EXPRESSED PROTEIN 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2857 Amo-Chr17 130649514 130652475 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2857 17 130649514 130652475 Amo17g2857 17 130649514 130652475 ECH
Amo16g4164 16 154296534 154306768 Amo17g2857 17 130649514 130652475 PCT
Amo17g2857 17 130649514 130652475 Amo16g4164 16 154296534 154306768 PCT