Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2841 ATGAAATCACAGAGAGGCGTGGGAAAAGCAGTGTCTATTGTCTCCACCATCTTCAAGTTCAACCCAATAATGGCTTCCCTGTTGCCATTGCTGTTTGTGTTTGCGATTCAACCATGGCAGGTGAGGTCGGAGCAGTACAACAACATATTCATACTTGCGGGACAGAGCAACATGGCAGGACGAGGTGGAGTCAGTGAAACAACGGCAACATGGGATGGTGTGGTTCCGCCGGAGAGCCAACCGAAGGCGTCGATTTTGCGGCTGAACGCGAAGCTGGAATGGATGGAAGCGCAAGAGCCACTCCACGCGGACATCGATGTGACGAAGACGAATGGAGTTGGACCGGGGATGGCGTTCGCGAACACGATCTTGGAGAAGCGACCGGGTTTCGGTGTGGTGGGTTTGGTGCCATGTGCAATCGGAGGCACAAACATAAGCGAGTGGGAACGCGGGAAAGTGCACTACACGCGCATGATGAAGAGGGTTAAGGCTTCGTTGCAAGGTGGTGGTGGCCTTCAAGCTCTGCTTTGGTATCAAGGTGAGTCTGATACTTTGCTTCTCAGTGATGCGCAATCTTATCGAACAAGACTTGGCAAGTTTTTCTTGGATCTTCGTGCTGATCTTAACTCTCCATTGCTTCCTATAGTTCAGGTAGCTTTGGCATCTGGAGAAGGCCCTTACATAGAGACAGTAAGAGAAGCTCAGCTTGATATGGACCTCCTCAACTTGAGAACTGTCGACGCAAAGGGCTTGCCCCTTGGGCCTGATGGGCTTCACCTTACCACCCAGGCCCAAGTTCATCTTGGGCAGGTAATGGCTGATGCATTTCTTCAATTCGTACCCACTTCACTTCCAAAAAACAATGTTCTTCCCATACATAATGGAGCTCCTCCTACAAGACCTCACAATGGTGCCTCCCAAATTTATATGATCCCAATATCGATAACATTTCTTACCATAGTATCATTAACTTTGTTATAG 981 0.4924 MKSQRGVGKAVSIVSTIFKFNPIMASLLPLLFVFAIQPWQVRSEQYNNIFILAGQSNMAGRGGVSETTATWDGVVPPESQPKASILRLNAKLEWMEAQEPLHADIDVTKTNGVGPGMAFANTILEKRPGFGVVGLVPCAIGGTNISEWERGKVHYTRMMKRVKASLQGGGGLQALLWYQGESDTLLLSDAQSYRTRLGKFFLDLRADLNSPLLPIVQVALASGEGPYIETVREAQLDMDLLNLRTVDAKGLPLGPDGLHLTTQAQVHLGQVMADAFLQFVPTSLPKNNVLPIHNGAPPTRPHNGASQIYMIPISITFLTIVSLTLL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2841 326 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 48 278 IPR005181 -
Amo17g2841 326 SUPERFAMILY SGNH hydrolase 48 280 - -
Amo17g2841 326 Gene3D SGNH hydrolase 47 280 IPR036514 -
Amo17g2841 326 PANTHER CARBOHYDRATE ESTERASE-RELATED 40 282 - -
Amo17g2841 326 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 40 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2841 Amo-Chr17 130440531 130443586 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2841 17 130440531 130443586 Amo17g2841 17 130440531 130443586 ECH
Amo16g3818 16 149919772 149922948 Amo17g2841 17 130440531 130443586 PCT
Amo17g2841 17 130440531 130443586 Amo16g3818 16 149919772 149922948 PCT