Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2840 ATGGGAGGTTGGGCAATAGCTGTGCATGGTGGCGCTGGCGTGGACCCAAATCTCCCACCTCAACGCCAGGAAGAGGCCAAGCAACTCCTTGCTCGTTGCCTCAACCTTGGCATCTCTTCTCTTCATTCCAATGCTTCCGCCATCGACGTCGTTGAACTTGTCGTGAGGGAGCTGGAAACGGATCCACTGTTCAACTCTGGGCGCGGATCTGCGCTGACAGAAAACGGTACAGTGGAAATGGAGGCAAGCATCATGGACGGTCCCAAGAGACGTTGCGGCGCCGTTTCTGGCCTCACAACCGTCAAGAACCCTATCTCTCTTGCTCGCCTTGTCATGGATAAGTCCCCCCATTCCTACCTTGCCTTCTCCGGCGCTGAAGATTTCGCCAGGCTCCAGGGTGTGGAGGTTGTGGAGAACGAATACTTCATTACCCCTGAGAATGTTGGGATGCTGAAGCTCGCAAAGGAAGCCAATACAATCCTGTTCGACTACAGGATTCCAACGAACGGTTACGACACGTGCGGCGCGGGAGTGGAGAGCCCAGTGAAGATGAACGGGCTTCCGATAAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAAGGAAGGTAGATGTGCGGCTGCCACGTCGACAGGGGGGCTCATGAACAAGATGACAGGTAGGATCGGTGACTCACCGCTCATAGGAGCTGGAACTTACGCGTGTGAGTTGTGCGGTGTGTCGTGCACGGGTGAAGGGGAGGCTATCATACGCGGGACTCTGGCGCGTGAGGTTGCGGCCGTTATGGAATACAAGGGCCTGGGCCTTCAGGAAGCGGTGGACTTTGTGATCAAGAATAGGCTCGACGAAGGGTTCGCTGGGCTCATAGCGGTGTCTAATAAGGGTGAGGTGGCTTATGGGTTCAACTGCAATGGCATGTTTAGGGGCTGCGCCACTGAGGATGGCTTCATGGAAGTGGGAATCTGGGAATAG 981 0.5627 MGGWAIAVHGGAGVDPNLPPQRQEEAKQLLARCLNLGISSLHSNASAIDVVELVVRELETDPLFNSGRGSALTENGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEDFARLQGVEVVENEYFITPENVGMLKLAKEANTILFDYRIPTNGYDTCGAGVESPVKMNGLPISVYAPETVGCVVVDKEGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACELCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQEAVDFVIKNRLDEGFAGLIAVSNKGEVAYGFNCNGMFRGCATEDGFMEVGIWE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2840 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Amo17g2840 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Amo17g2840 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
Amo17g2840 326 CDD Asparaginase_2 5 318 - -
Amo17g2840 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
Amo17g2840 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2840 Amo-Chr17 130430191 130432099 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2840 6 286 Miscellaneous Gene Families AT4G00590 27.723 4.64e-19 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2840 17 130430191 130432099 Amo17g2840 17 130430191 130432099 ECH
Amo06g3072 06 97609544 97611953 Amo17g2840 17 130430191 130432099 PCT
Amo17g2840 17 130430191 130432099 Amo06g3072 06 97609544 97611953 PCT