Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2391 ATGGTAAAGACAATTCCATCTAAAGCGAAGGTAAGCATAATCAATTTGGTGTTCTTAGCCGTCTTTCTGGTTGTTTATGGAACCCTTCTTCTCCGGCCATCTTCTTCTCTCTATTTCGAGAATGCAGCCTCCCTTGTAAGATGCTCCCTCCGCGAATGTCGACACAAGGTAGAAAAGAGCTTCAAAATGAAAGCAGTGTTAGAGGAACCTCAACGAGAGAGATCATCAAAGAAGAACAATGCAACTAATAAGATAGAGTTACCTAGCTTCTTTGGTGATTTAGGGAAAGGAATGAAGATAGGACTGGTCAACATGGATGAAGAAGATGTAAATGAGTTCAACCTGCATGGAGAAATGATACCAGTTTATTTTGAGAAGGTATCACAGTCTTTCAACTGGACAGACTTGTTTCCCGAATGGATAGACGAGGAAGAAGAGAGTGACGTGGCGTCATGCCCGGAGATACCTATGCCGGAGTATGCAGAATATGGGAGCATGGACGTCATAGTGGCCAAGCTGCCATGCAAGTACCCTGAAAAGGGGTGGGGTAGGGACGTTTTCCGGTTGCAGGTTCATCTAATAGCAGCGAATCTGGCGGCAAAGAAGGGGAAGAGGGATTGGAGATGGAAGAAGACAACGAGGGTGGTTCTGTGGAGCAAGTGTAGGCCAATGATGGAGCTGTTCCCATGCGACCAATTGGAGAGGAGGGAAGGTGAGTGGTGGTATTACAAAGCGGACGTGAAGAAGTTGGAGGAGAAGGTTTTGTTGCCTGTTGGGTCCTGCAACTTGGCTTTGCCTCTTTGGGAACAAGGTATCGATGAGGTTTACGACGTGTCCAAGATCCAAAGAAGTGTGAAATCCAGATCAAGAAAAAACCGCGAGGCCTACGCCACCGTGCTCCATTCCTCCGAAGCCTACGTTTGCGGCGCCATAACTCTCGCACAGAGCCTCATCCAAACGGGAACCAAACGCGACCTTGTTCTCCTTATCGACAACTCAATCTCCGCCCCGAAACGCCGCGCACTCGCCTCCGCAGGCTGGAAGATTCGAATCATAACACGAATCCGAAACCCTAGGGCCGAGAAAGGAACCTACAACGAGTACAACTACAGCAAGTTTCGCCTATGGCAGCTCACGGACTACGACAAAATCATCTTCATCGACTCCGATATCATCGTGCTCCGGAACCTGGACATACTCTTCCACTTCCCTCAGATCTCGGCCACGGGGAACGACCAGACGATATTCAACTCGGGGATCATGGTGATCGAGCCTTCGAACTGCACGTTCGCGACGTTGATGAGCCTCCGAGACGGCATCGTTTCGTACAACGGAGGTGACCAAGGGTTCCTGAACGAGGTTTTCGTGTGGTGGCACAGGTTACCGAGGAGGGTGAACTTCTTGAAGAACTTCTGGTCGAATTCGACGCTGGAGAGGAGGGTGAAGAACGGTTTGATCGGTTCGGAGACGGCGGAGGTGTACGCCGTACACTACTTAGGGTGGAAGCCGTGGCAGTGTTACAGGGACTATGATTGCAACTGGGACGTGGAGGAGCAATTGGTGTACGCGAGTGACGTGGCGCACAGGAGGTGGTGGAAGGTGCACGACGCCATGGATGAAGAGATGCAGAGGATGTGCAGGCTCACAAAACGGCGTCGTACTGAGCTCAATTGGGAAAGAAGGAAAGCGAGGAAAAAGGGTTTAGTGAATGGGCATTGGAAGATCAATATTACGGATCCTAGACGATTTGGCTCTCTTTTGATTCATTAG 1770 0.4994 MVKTIPSKAKVSIINLVFLAVFLVVYGTLLLRPSSSLYFENAASLVRCSLRECRHKVEKSFKMKAVLEEPQRERSSKKNNATNKIELPSFFGDLGKGMKIGLVNMDEEDVNEFNLHGEMIPVYFEKVSQSFNWTDLFPEWIDEEEESDVASCPEIPMPEYAEYGSMDVIVAKLPCKYPEKGWGRDVFRLQVHLIAANLAAKKGKRDWRWKKTTRVVLWSKCRPMMELFPCDQLERREGEWWYYKADVKKLEEKVLLPVGSCNLALPLWEQGIDEVYDVSKIQRSVKSRSRKNREAYATVLHSSEAYVCGAITLAQSLIQTGTKRDLVLLIDNSISAPKRRALASAGWKIRIITRIRNPRAEKGTYNEYNYSKFRLWQLTDYDKIIFIDSDIIVLRNLDILFHFPQISATGNDQTIFNSGIMVIEPSNCTFATLMSLRDGIVSYNGGDQGFLNEVFVWWHRLPRRVNFLKNFWSNSTLERRVKNGLIGSETAEVYAVHYLGWKPWQCYRDYDCNWDVEEQLVYASDVAHRRWWKVHDAMDEEMQRMCRLTKRRRTELNWERRKARKKGLVNGHWKINITDPRRFGSLLIH* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2391 589 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 291 542 IPR029044 -
Amo17g2391 589 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 1 582 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Amo17g2391 589 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 582 - -
Amo17g2391 589 CDD GT8_Glycogenin 294 538 - -
Amo17g2391 589 Pfam Glycosyl transferase family 8 299 505 IPR002495 GO:0016757
Amo17g2391 589 SUPERFAMILY Nucleotide-diphospho-sugar transferases 294 543 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2391 Amo-Chr17 119832093 119836304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2391 83 588 Glycosyltransferase AT4G33330 68.493 0.0 740
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2391 17 119832093 119836304 Amo17g2391 17 119832093 119836304 ECH
Amo16g3853 16 150339025 150344509 Amo17g2391 17 119832093 119836304 PCT
Amo17g2391 17 119832093 119836304 Amo16g3853 16 150339025 150344509 PCT