Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2242 ATGGGAGCCGAACAACCGTTCCCGGAAGCAGAAGCAGAGGCTTCCATGGTGGTGGGTCTCCAACCCTCAGCCATGGTCGACACCATCGCCCTCGTTGACTCCTCCTTCCTCGATGGAATTCCCGGCGAACCCGGTGGCTCCATTCCCGTTGGCATTGAAGAGCTTGATTATATACGGAGAGAGCTGAAAGAGGATCACGGTGAGAAGACCATCGCTGGAGGCAGTGTTGCCAACACCATCCGCGGCCTGCGCACTTCCTTCGGAATTCCCACTGCAATTATTGCTGCCTACGGGGATGACCACCAGGGGAACCTCTTTCTCAACAACATGAGCTTCAATGGAGTCAACCTCTCCTGCCTCCGCAAGAAGAAAGGCCACACTGCTCAGTGCGTCTGCTTGGTTGATCACTCAGGCAACCGTACTATGCGTCCCTCTCTCTCCAATGCTGTCAAAGTTCAGGCACACGAACTCGTTCGAGAGGACTTCAAGGGTTCCAAGTGGCTGGTTTTGAGGTATGCAATTCTCAATTTGGAAGTTATTCAAGCAGCAATCTCTTTGGCCAAACAGGAAGGTCTTCTTGTTTCTTTGGATTTGGCCAGTTTTGAGGTACTAACCACCACAATTTGTTTTTCTTCTTCTTTTATTCTCTTCCATGAAAAAATTAATGAAGCTAACTGTTTTCTAATACATCTTTTCTTTGGCAAGCTGGTGAGGAAATTTAAGCCACCACTTATGAAGTTATTGGAGTCTGGCAATATAGACCTCTGTTTTGCCAATGAGGATGAAGCAACGGAACTTCTAAGGGATGAGCATAATGCCGATCCAGTTGCTGCTGTAGAATTTCTAGCTAAGTATTGCAAATGGGCTGTGGTAACTTTGGGCCATAATGGATGCATTGCTAAACATGGCAAGGAGATGGTACGGGTCCCGGCCATAGGAGAAGCAAAAGCAATAGATGCTACTGGAGCAGGGGACCTTTTTGCTAGTGGATTTTTGTATGGAATGGTGAAGGGTTTGTCCCTTGAAGAATGTTGCAAAATAGGTGCATGTAGTGGCGGATCTGTTACCCGCTCTCTTGGTGGTGAGGTGACATTAGAGAATCGGCAATGGCTGTACAAGCAGATGAAGATAAGAGATCTTCACATGCCTGATGGCATATGCGAATGA 1167 0.4773 MGAEQPFPEAEAEASMVVGLQPSAMVDTIALVDSSFLDGIPGEPGGSIPVGIEELDYIRRELKEDHGEKTIAGGSVANTIRGLRTSFGIPTAIIAAYGDDHQGNLFLNNMSFNGVNLSCLRKKKGHTAQCVCLVDHSGNRTMRPSLSNAVKVQAHELVREDFKGSKWLVLRYAILNLEVIQAAISLAKQEGLLVSLDLASFEVLTTTICFSSSFILFHEKINEANCFLIHLFFGKLVRKFKPPLMKLLESGNIDLCFANEDEATELLRDEHNADPVAAVEFLAKYCKWAVVTLGHNGCIAKHGKEMVRVPAIGEAKAIDATGAGDLFASGFLYGMVKGLSLEECCKIGACSGGSVTRSLGGEVTLENRQWLYKQMKIRDLHMPDGICE* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2242 388 PANTHER SUGAR KINASE 9 378 - -
Amo17g2242 388 PANTHER CARBOHYDRATE KINASE-LIKE 9 378 - -
Amo17g2242 388 CDD adenosine_kinase 16 360 - -
Amo17g2242 388 Pfam pfkB family carbohydrate kinase 59 194 IPR011611 -
Amo17g2242 388 Pfam pfkB family carbohydrate kinase 240 360 IPR011611 -
Amo17g2242 388 SUPERFAMILY Ribokinase-like 22 361 IPR029056 -
Amo17g2242 388 Gene3D - 17 367 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2242 Amo-Chr17 115005165 115007803 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2242 17 115005165 115007803 Amo17g2242 17 115005165 115007803 ECH
Amo08g0085 08 1791734 1794252 Amo17g2242 17 115005165 115007803 hybridization
Amo16g3984 16 151800908 151804733 Amo17g2242 17 115005165 115007803 PCT
Amo17g2242 17 115005165 115007803 Amo16g3984 16 151800908 151804733 PCT