Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2199 ATGGGTATCCACCACCCCACTCGTGCGTGCTATCTATCAATGGCGGCTCGCCAATTGCTCAAGCCCCAAGATCCAATGGCTGATTCAGGATCCTCATCGTCAAGGAGGATGTGGTGCTCCATCCCAGAGAAGCTTCAACTACATGGTGCCATGCTGGCACTCCAGTTTGGCTATGCTGGCTTTCATGTTGTCTCAAGAGCTGCCCTTAACATGGGCGTTAGCAAACTTGTCTTCCCAGTCTACCGCAACATCATTGCTTTTCTCCTCCTCCTTCCCTTTGCATACTTCTTGGAGAAGAAGGAGAGGCCTGCCATTACTTTAAACTTCTTGCTGCAGTTCTTTCTTCTGGCACTTGTTGGGATTACAGCGAACCAAGGGTTTTACTTGCTGGGATTGGACAACACATCTCCAACATTTGCATCTGCAATACAGAACTCTGTCCCAGCCATTACATTTCTCATGGCAGCCATACTCAGGATAGAGAAAGTGCGGCTCGACAGAAAAGATGGCATGGCAAAGGTAGCCGGAACAGTATTCTGTGTGGCGGGGGCGTCCGTCATAACACTCTACAAGGGTCCAACCATCTACAGCCCAGAACCACCGCTGCAGACCGCAGCCATGAGCTTAGGGGCGGCAGCAGAAGAGGGAAAGAACTGGACCCTGGGATGTGTCTACCTCATTGGCCATTGCTTGTCTTGGTCCGGTTGGCTCGTCCTGCAGGCTCCGGTTCTGAAGAAGTACCCGGCTCGGCTCTCCGTGACTTCCTACACGTGCTTCTTTGGACTGTTGCAATTCCTTGCCATTGCTCTGGTGGTTGAAAGAGATGTGAATGCTTGGATTTTCCAATCAGGTGCTGAAGTCTTCACTATTGTATACGCGGGAGTGGTTGCTTCCGGCATAGCCTTTGCGGTGCAGATATGGTGCATTCACAGAGGTGGCCCTGTGTTCGTGGCGGTGTATCAGCCAGTCCAGACTCTTGTCGTCGCTGTCATGGCTTCCCTTGCTTTGGGTGAACAGTTCTACTTAGGCGGGATCATTGGAGCAGTTTTGATCGTAGTGGGTCTGTATCTAGTCCTGTGGGGTAAATCCGAAGAGAAGAAATTTGCATCTCAATCGCAACATGTCATTGCTTCTGGTCCAGAGCACAGTAGCATCAGGCCCGCAAGCCATGCCAAACCATCTCTTACTCAGCCTCTTCTTCCTTCCTCAACGGAAAATGTTTGA 1224 0.5098 MGIHHPTRACYLSMAARQLLKPQDPMADSGSSSSRRMWCSIPEKLQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEKVRLDRKDGMAKVAGTVFCVAGASVITLYKGPTIYSPEPPLQTAAMSLGAAAEEGKNWTLGCVYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLAIALVVERDVNAWIFQSGAEVFTIVYAGVVASGIAFAVQIWCIHRGGPVFVAVYQPVQTLVVAVMASLALGEQFYLGGIIGAVLIVVGLYLVLWGKSEEKKFASQSQHVIASGPEHSSIRPASHAKPSLTQPLLPSSTENV* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2199 407 MobiDBLite consensus disorder prediction 389 407 - -
Amo17g2199 407 PANTHER WAT1-RELATED PROTEIN 37 383 - -
Amo17g2199 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 81 191 - -
Amo17g2199 407 Pfam EamA-like transporter family 221 359 IPR000620 GO:0016020|GO:0016021
Amo17g2199 407 Pfam EamA-like transporter family 52 188 IPR000620 GO:0016020|GO:0016021
Amo17g2199 407 PANTHER WAT1-RELATED PROTEIN 37 383 IPR030184 GO:0016021|GO:0022857
Amo17g2199 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 264 363 - -
Amo17g2199 407 MobiDBLite consensus disorder prediction 379 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2199 Amo-Chr17 112878065 112881753 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2199 17 112878065 112881753 Amo17g2199 17 112878065 112881753 ECH
Amo06g0717 06 10153981 10156861 Amo17g2199 17 112878065 112881753 PCT
Amo17g2199 17 112878065 112881753 Amo06g0717 06 10153981 10156861 PCT